FMO03586.5prime Sequence
1216 bp (1032 high quality bases) assembled on 2008-07-14
> FMO03586.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGGCATTTCTT
TGGGCATTGGTGATTTTACTGGGCTATATCCCGCAGAGTACAATCGCCAA
GACTGTATCCACTGATTTTTTAGATCTTCTCGACTTCAGCGATAATGATG
AGTTTCAATGGGGGGAGTCGGAGAATCAGGTATACGAAAATCGCACTGGG
GAAAACCGCGTCGTAAGTTTCCTGTCCCAACATCGCCTAAACAAGCGACA
GGCTCCCACCTCGCAATTGCTGGAGAACAAGGATTATGGAGCATGTAGCA
CTCCATTGGGTGAATCCGGCCGATGTCGCCACATTATCTACTGTCGCATG
CCAGAACTTAAGAATGATGTCTGGCGTCTGGTCTCCCAGCTTTGCATCAT
TGAGAAAAGCTCCATAGGCATTTGCTGCACTGACCAGTCGACGAGCAACC
GATTTAGTCCGCAAGTCGTGACCAGTGCGGACGGTGATGAGCCGCGCATC
GTTAATAAGCCGGAGCAGCGAGGTTGTGGGATCACGTCCAGGCAGTTTCC
CCGCCTCACCGGTGGACGGCCAGCCGAGCCAGACGAGTGGCCTTGGATGG
CGGCCCTGCTGCAGGAGGGTCTGCCCTTCGTTTGGTGCGGTGGTGTCCTG
ATCACCGACCGTCATGTCCTAACTGCCGCTCACTGCATCTACAAGAAGAA
CAAGGAGGACATCTTCGTGCGTCTGGGCGAGTACAACACGCATATGCTGA
ATGAGACGAGGGCGAGGGATTTCCGGATTGCCAACATGGTGCTCCATATC
GATTATAATCCACAGAACTACGACAATGATATTGCAATTGTCAGATTCGA
CAGGGCGACTATATTCAACACCTACATCTGGGCCAGTTTGCATGCCGCCC
GTGAACGAAGATTGATCGGATAAGAAACGCCATTGTCACCGGGTTGGGGC
ACCCAAAGTTTGGCCGTCCTCATTCTAACATCCTCATGGAGGTTAAACTG
CCGGTTTGAAGCAGTCGGATTGCAGTCGTCATTTGTAGCACGTTCGACCT
GCCCTTGTGCGCCTGATTCCGAGGAGTAAGACTCTGTCAGCATAAGCGAG
TCCTCTGTTTGTACCACCTCCTACAAGCTGACCAGATCGGAATCGGTCTG
GATCGCATTGCGACTGCGGGGTGTTCACCAGATTCTCAACTCCGCGTGTG
AATCAGCTACCTAGTG
FMO03586.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9372-RA | 1693 | CG9372-RA | 374..1385 | 36..1045 | 4810 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19607244..19607827 | 408..993 | 2695 | 98.1 | Plus |
| 3L | 28110227 | 3L | 19606831..19606982 | 122..273 | 760 | 100 | Plus |
| 3L | 28110227 | 3L | 19607040..19607177 | 272..409 | 690 | 100 | Plus |
| 3L | 28110227 | 3L | 19606581..19606668 | 36..123 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:51:33 has no hits.
FMO03586.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:15:22 Download gff for
FMO03586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9372-RA | 362..1394 | 26..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:45 Download gff for
FMO03586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9372-RA | 364..1396 | 26..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:59 Download gff for
FMO03586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9372-RA | 364..1396 | 26..1053 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:59 Download gff for
FMO03586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19606571..19606668 | 26..123 | 95 | -> | Plus |
| 3L | 19606833..19606981 | 124..272 | 100 | -> | Plus |
| 3L | 19607041..19607177 | 273..409 | 100 | -> | Plus |
| 3L | 19607246..19607825 | 410..991 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:45 Download gff for
FMO03586.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19599671..19599768 | 26..123 | 95 | -> | Plus |
| arm_3L | 19599933..19600081 | 124..272 | 100 | -> | Plus |
| arm_3L | 19600141..19600277 | 273..409 | 100 | -> | Plus |
| arm_3L | 19600346..19600925 | 410..991 | 98 | -> | Plus |
