FMO03590.5prime Sequence
524 bp (524 high quality bases) assembled on 2008-07-14
> FMO03590.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCGACACACAA
GCCAAGTCCACTACTGCGCCCAAGGCCGCCAAGGCCCAGAAGGCTCCCAA
GGCCGTCAAGGCGCCTAAGGCCGAGAAGCCCGCCGCCTCAGAGGCTAAAG
TTTCCGCCAAGAAGTACAAGCGTCACGGACGCCTCTTCGCCAAGGCCGTC
TTCACCGGCTACAAGCGTGGTCTGAGGAACCAGCACGAGAACCAGGCCAT
CCTCAAGATTGAGGGCGCCCGCCGCAAGGAGCACGGATCCTTCTACGTTG
GGAAGCGTTGCGTCTATGTCTACAAGGCCGAGACCAAGAAGTGCGTGCCG
CAGCATCCCGAGCGCAAGACCCGCGTCCGCGCTGTCTGGGGCAAGGTCAC
CCGCATCCACGGCAACACCGGCGCTGTGCGTGCCCGTTTCAACAGGAACC
TGCCCGGTCATGCCATGGGCCACCGCATCCGCATCATGCTGTACCCATCA
AGGATTGCAAGCTTTCTAGACCAT
FMO03590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL35A-RA | 621 | CG2099-RA | 69..540 | 35..506 | 2360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5465800..5466029 | 485..256 | 1150 | 100 | Minus |
| 3R | 32079331 | 3R | 5466153..5466375 | 257..35 | 1115 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 23:01:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 7106..7141 | 275..240 | 108 | 77.8 | Minus |
FMO03590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:17:51 Download gff for
FMO03590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL35A-RA | 62..546 | 29..518 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:47 Download gff for
FMO03590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL35A-RA | 66..550 | 29..518 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:47:18 Download gff for
FMO03590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL35A-RA | 66..550 | 29..518 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:47:18 Download gff for
FMO03590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5465800..5466027 | 258..485 | 100 | <- | Minus |
| 3R | 5466153..5466378 | 29..257 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:47 Download gff for
FMO03590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1291522..1291749 | 258..485 | 100 | <- | Minus |
| arm_3R | 1291875..1292100 | 29..257 | 98 | | Minus |
