FMO03595.5prime Sequence
753 bp (753 high quality bases) assembled on 2008-07-14
> FMO03595.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGTTAAATAC
CCTGCGGCTTGCCTTGATTTTCCTAAGTTTTGTTCGCCTGGAGGCGCAGG
CTAATGTTCAGAATAATGGCTGGCAGAAGGTGTTGCCTGATGACTTCAGA
CGAGAACGTGATAAAAGTTCAACCAGAACGCGCCGGAATCCGCAGGAGGA
ATTGCGCCTGAGACACGAGCAGCATCATTTGCGCCTGCAGCAACATCAGA
TGGCGTGGGAGCTGGACTTGCAGCGGCAGCTGCAGCAGCATCTGCAGGAG
CAGCAGTCGGAGCAGTCGGAGCAGCAGAGCCGGCCGGTGCGTCATCATCA
GCATAAATCTCACACCAAGGAACTGGCCAAGAAGCCCATTAGACGGGCAC
CGAGTTTCGGCGATGACAAGGCCAAGATGGTGCAGAAGCGCAGACTACAC
TACAACGAGTACGATAACGAAGATCTCGAGCTGCACACCATCGAAACCGG
CGATCAGGGGACCTTCACCCCGCGGCAGTGGCAGCAAATCGAGATTGCCC
ATCGGCGGCAGAAGGAGCAACATCAATTGCAGTTGCTGGCGCAACGACAA
CAGCAGCGACAACTGCTGACAACGACAACGGCAACGGCAACGGCAATGGC
AATGGCAACAACGTCGAAAGCAACGGAACCCAATGATGCCAAATCGGAGG
ATAATGATGTGAGTGAATCCAAGGGGGATTCGATTGCAAGCTTTCTAGAC
CAT
FMO03595.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pvf3-RA | 3486 | CG34378-RA | 133..811 | 37..715 | 3380 | 99.9 | Plus |
Pvf3-RE | 2485 | CG34378-RE | 675..1347 | 37..709 | 3365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7132697..7133395 | 735..37 | 3495 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:44:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2757..2870 | 562..676 | 221 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2421 | 557..674 | 219 | 67.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2400..2883 | 193..674 | 215 | 53.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6854 | 559..680 | 211 | 64.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1076..1171 | 550..646 | 203 | 69.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6878 | 526..680 | 195 | 59.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2255..2420 | 200..368 | 189 | 59.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6827 | 566..674 | 182 | 64.2 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7141..7226 | 590..674 | 157 | 66.3 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 8594..8679 | 590..674 | 157 | 66.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6917 | 550..674 | 155 | 60.6 | Plus |
FMO03595.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:17:01 Download gff for
FMO03595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pvf3-RB | 289..990 | 37..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:35 Download gff for
FMO03595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pvf3-RA | 133..817 | 37..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:57 Download gff for
FMO03595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pvf3-RA | 133..817 | 37..722 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:57 Download gff for
FMO03595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7132694..7133395 | 37..739 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:35 Download gff for
FMO03595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7132694..7133395 | 37..739 | 99 | | Minus |