FMO03601.5prime Sequence
1215 bp (1014 high quality bases) assembled on 2008-08-11
> FMO03601.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGTTGCGGTACAGACAAG
TGGTGGGTCTCCTTCAGCGCCGTAATTTCTCGGCCGGAGCAACGAGCAAT
GGAAGTGGATCTTCCGGGGGCGACAAATCCGGCGAAGACCTGCACCCCAT
ACGACGAACACTCCGTTTGCTCGGGAACGATATGCGCAAAGTTAAGGAGT
TCTTTGTACCAAAGGAACCGGAGACCGAGAAAGTTCCCATTCCGACACAG
AGCCAGTTTCACTTTTCAGGGGAGCGCGACAAGAGCAAGGAAGCCACTGT
GCCGGATGACTTCCAGACCCATTGCGATGTGCTCATCATTGGCGGCGGTG
GAGTGGGCAGCTCCATCGCCTATTGGCTGAAGGAGAAGGCCCGCGACGGT
CTTAACGTTGTGGTGGTCGAGAAGGATGACACGTATGCCCAGTCAGCCAC
GCGTGTTTCGGTGGGCGGTCTTTGTCAGCAATTCTCCCTGCCCGAAAACA
TCCAAATGTCACTATTTGCCGCAGACTTCCTGCGAAGCGCAAGAAAACAC
TTTGGCGAGGAAGTGCCTCTCCAGTTTACGCCCCATGGCCATCTGATGCT
CGCTGGCGAGGAGCACGCGGAAAGCCTGAAGCGCTCCTCTCAGCTACAAA
ACGAACTGGGTGCCCGAAATGAACTTCTCACTGCAGATCGACTGACTGCC
AGATTCCCCTGGCTAAACACCAAGGGCATCGCTTTGGGCTGTCTTGGTCT
GGAAAAAGAGGGCTGGTTTAATCCGTTGGCACTTCTGAGCAATTTCCGAC
GGTCAGCCAGTGGCTACGGCGCCCATTTTATCAGTGGCCAGGTGGTCGAC
TTCGAGTTCAAATCCCAAACGGACATTTCTGTTGTCCCAGATCTTGGTTT
CAACGAGGGTGCCTACACGGGCTTGGGAAAAGCGGTCATCCCACTGCCCG
ATGGTACGCGACGCACTTGCAAGTTCGCCTGTGTGTATAAGCGCCGCTGC
TAGTTCCGAACAATCGGCGCGATAGCAAGATAGCGTGGTCAGATTACTTC
CGGTTCGGCTGCCATCACGCACGCAGCGATACATGTACGCATCAACTGCA
GGCCAGGTGCACCGGAATGATATGCCCATGACAATAGATCGTCGGAATCT
TATTCCAAATGGCTTGGCGCAACATAATTTGGGCTGCAGAATTCGCACGG
AGAGCGTATATATGA
FMO03601.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Bb-RA | 1708 | CG10655-RA | 115..1246 | 32..1145 | 5040 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19050443..19051035 | 1023..433 | 2745 | 98.3 | Minus |
| 2L | 23513712 | 2L | 19051097..19051498 | 433..32 | 2010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:33:20 has no hits.
FMO03601.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:24 Download gff for
FMO03601.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Bb-RA | 115..1098 | 32..1013 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:18 Download gff for
FMO03601.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Bb-RA | 109..1092 | 32..1013 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:28 Download gff for
FMO03601.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Bb-RA | 115..1098 | 32..1013 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:28 Download gff for
FMO03601.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19050453..19051034 | 434..1013 | 98 | <- | Minus |
| 2L | 19051097..19051498 | 32..433 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:24 Download gff for
FMO03601.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19050453..19051034 | 434..1013 | 98 | <- | Minus |
| arm_2L | 19051097..19051498 | 32..433 | 100 | | Minus |
