FMO03604.5prime Sequence
1023 bp (1023 high quality bases) assembled on 2008-08-11
> FMO03604.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTTTTAACACCA
ACGAAAGATGGGCCCGACCAGGAGAGCATGCCGTTGCCGGCCGACAATGG
GGAGTCACCAAGTAAACAGCAGGCCCCTGTCAATCGGGATGAGATGCACT
ACTTGGATCTTCTGAGGCACATCATCGCAAATGGAGAGCAGCGGATGGAC
CGCACGGAGGTGGGCACTCTGTCCGTGTTCGGCAGTCAGATGCGCTTCGA
CATGCGGAACTCCTTTCCTTTGCTGACCACGAAGCGCGTCTTCTTCCGCG
CGGTGGCCGAGGAGCTGCTGTGGTTCGTGGCGGGCAAGACGGACGCCAAG
CTGCTGCAGGCGAAGAATGTGCACATCTGGGATGGGAACAGCTCCAGAGA
ATTTCTGGACAAGATGGGGTTCACGGGGCGAGCCGTTGGGGATCTGGGGC
CGGTGTACGGCTTCCAATGGAGGCATTTCGGGGCGCAGTACGGCACCTGC
GACGACGACTACAGCGGCAAGGGGATCGACCAGCTGCGCCAGGTGATCGA
CACCATCAGGAATAACCCCTCAGACCGTCGCATCATCATGTCGGCTTGGA
ATCCACTGGACATCCCAAAGATGGCCCTGCCGCCGTGCCACTGCTTGGCG
CAGTTTTACGTCTCCGAGAAGCGCGGTGAGCTTTCGTGCCAGCTATACCA
GAGAAGCGCAGACATGGGCCTGGGCGTACCCTTCAACATCGCCTCCTATG
CCCTGCTCACCCACATGATTGCCCATGTGACGGGTCTGAAAGCCGGGCGA
CTTTGTTCACACCATGGGCGACACACACGTCTACCTGAACCACGTAGAGC
CGCTGAAGGAGCAACTGGAGCGCACACCGCGACCCTTTCCCAAGCTGATC
ATTAAACGTCAGGTGCAGGACATCGAGGACTTCCCGCTTCGAAGGGACTT
TCAGATAGTCGACTACATCCAACATCCAAAAATCCAAAATGGATCATGGG
CCGTGGCAAGCTTTCTAGACCAT
FMO03604.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ts-RB | 1136 | CG3181-RB | 65..1031 | 32..1005 | 4645 | 99 | Plus |
| Ts-RA | 1346 | CG3181-RA | 65..1031 | 32..1005 | 4645 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2968622..2969574 | 988..32 | 4560 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:17:58 has no hits.
FMO03604.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:58 Download gff for
FMO03604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ts-RA | 56..1031 | 24..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:00 Download gff for
FMO03604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ts-RA | 38..1013 | 24..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:33 Download gff for
FMO03604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ts-RA | 56..1031 | 24..1005 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:33 Download gff for
FMO03604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2968608..2969573 | 33..1005 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:58 Download gff for
FMO03604.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2968608..2969573 | 33..1005 | 98 | -> | Minus |
