FMO03608.5prime Sequence
549 bp (549 high quality bases) assembled on 2008-08-11
> FMO03608.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGAATAATTGTATTAA
AGTAGTGCCCATTGCCCTAAGGTGCCAGCAGAGGACCATCAGTACTTCAT
CCGTGCTGGAGGGCAAGCGGAACTTCCGTAAATTTAACGCATACAACAAG
CGCGGTACGCGCGTGGTAAAGGAAGCCCAGAAAACACTGGCCAATCCGCC
GGTAGCCATTCACAAGCGAGGTGTACGAGACACGGGCATACTTGTCGACG
GGCAGTATGTGGAGATTCCCGAGAAAATTCCGGACATCATAGTTCCCGAT
TTGACCGGTTGTAAGCTAAAGCCATACGTGTCCTATAAGGCGCCGGACGT
CGTCCAGTCGGAGTTCACCAGCTTGGATCTCTTCAACGCCGTCTACTCGC
AGAAGATTATCGAAGATTTCAAGGCGGGAAAACTGCAGAAGGACGGCAGC
GCCAAGGAGCCCTCGGTCAATGAGCAACTGACTCCGGAGGAGGCCTTGCA
ACGCGCTCGAAAGACGGGCAGCGATATATTCGCAAGCTTTCTAGACCAT
FMO03608.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL41-RA | 594 | CG12954-RA | 54..551 | 34..531 | 2490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15217067..15217564 | 531..34 | 2490 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:17:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rt1c | 5443 | Rt1c RT1C 5443bp | 3431..3568 | 323..462 | 118 | 55.7 | Plus |
FMO03608.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:43 Download gff for
FMO03608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL41-RA | 52..551 | 31..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:21 Download gff for
FMO03608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL41-RA | 48..547 | 31..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:08 Download gff for
FMO03608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL41-RA | 52..551 | 31..531 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:08 Download gff for
FMO03608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15217067..15217566 | 31..531 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:43 Download gff for
FMO03608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11104572..11105071 | 31..531 | 99 | | Minus |
