FMO03610.5prime Sequence
415 bp (415 high quality bases) assembled on 2008-08-11
> FMO03610.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGAACAAGCGCAACC
ATATCCGCCTGCCGCCAGAGGTGAATCGGCTATTGTACGTGCGGAACCTG
CCGTACAAAATCACCTCGGACGAGATGTACGACATATTCGGCAAATTTGG
AGCCATTCGACAGATACGCGTAGGCAACACTCCGGAAACGCGTGGCACCG
CCTTTGTCGTCTACGAGGACATTTTCGATGCCAAGAACGCCTGTGACCAT
TTATCGGGTTTTAATGTGTGCAATCGCTATCTGGTGGTGCTCTACTACCA
ATCCAACAAGGCCTTCAAGCGCGTGGACATGGACAAGAAACAGGAGGAAC
TGAACAACATTAAGGCCAAGTACAATCTGAAGACGCCTGAAGCTCCTGCA
AGCTTTCTAGACCAT
FMO03610.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13298-RA | 920 | CG13298-RA | 195..560 | 32..397 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6192484..6192709 | 397..172 | 1130 | 100 | Minus |
| 3L | 28110227 | 3L | 6192776..6192894 | 171..53 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:31:54 has no hits.
FMO03610.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:52 Download gff for
FMO03610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13298-RA | 195..560 | 32..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:33 Download gff for
FMO03610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13298-RA | 202..567 | 32..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:37 Download gff for
FMO03610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13298-RA | 195..560 | 32..397 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:37 Download gff for
FMO03610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6192484..6192709 | 172..397 | 100 | <- | Minus |
| 3L | 6192776..6192894 | 53..171 | 100 | <- | Minus |
| 3L | 6192965..6192985 | 32..52 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:52 Download gff for
FMO03610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6185584..6185809 | 172..397 | 100 | <- | Minus |
| arm_3L | 6185876..6185994 | 53..171 | 100 | <- | Minus |
| arm_3L | 6186065..6186085 | 32..52 | 100 | | Minus |
