FMO03619.5prime Sequence
721 bp (721 high quality bases) assembled on 2008-08-11
> FMO03619.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTGAAATTGA
CTTTATACGGTTTGGACCCCAGTCCCCCAGTTCGCGCTGTTAAGCTTACT
TTGGCCGCTCTAAACCTAACCTACGAATATGTAAACGTTGACATTGTGGC
TCGTGCCCAACTTTCACCGGAATATCTGGAGAAGAATCCACAGCATACGG
TGCCCACCCTGGAGGATGACGGTCACTACATCTGGGATTCGCATGCCATT
ATTGCCTATTTGGTCTCGAAATATGCCGATTCCGATGCCCTATACCCGAA
AGATCCTCTCAAGCGGGCTGTTGTGGATCAGCGGCTGCACTTTGAATCCG
GAGTGGTCTTTGCCAATGGCATAAGGAGCATATCGAAGTCAGTGCTCTTC
CAGGGACAGACGAAAGTACCCAAGGAGCGATACGATGCCATTATCGAGAT
CTACGATTTTGTGGAAACTTTTCTCAAGGGACAGGATTACATTGCTGGCA
ATCAACTGACCATTGCGGATTTCAGTCTCGTTTCATCGGTGGCCTCCCTT
GAGGCCTTCGTGGCCTTGGATACGACTAAGTATCCCAGGATCGGTGCTTG
GATCAAAAAGCTGGAACAGCTTCCATACTACGAGGAAGCCAATGGCAAGG
GCGTCCGCCAGTTGGTGGCCATTTTCAAGAAGACCAATTTCACATTCGAA
GCAGCAAGCTTTCTAGACCAT
FMO03619.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE6-RA | 751 | CG17530-RA | 32..697 | 38..703 | 3330 | 100 | Plus |
| GstE5-RA | 734 | CG17527-RA | 28..685 | 36..693 | 800 | 75 | Plus |
| GstE7-RA | 765 | CG17531-RA | 169..642 | 175..648 | 495 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18406042..18406707 | 38..703 | 3330 | 100 | Plus |
| 2R | 25286936 | 2R | 18404632..18405289 | 36..693 | 800 | 74.8 | Plus |
| 2R | 25286936 | 2R | 18407092..18407565 | 175..648 | 480 | 73.4 | Plus |
| 2R | 25286936 | 2R | 18408003..18408344 | 181..522 | 390 | 74.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:49 has no hits.
FMO03619.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:50 Download gff for
FMO03619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE6-RA | 32..697 | 38..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:57 Download gff for
FMO03619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE6-RA | 30..695 | 38..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:40 Download gff for
FMO03619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE6-RA | 32..697 | 38..703 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:40 Download gff for
FMO03619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18406042..18406707 | 38..703 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:50 Download gff for
FMO03619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14293547..14294212 | 38..703 | 100 | | Plus |
