FMO03621.5prime Sequence
911 bp (911 high quality bases) assembled on 2008-08-11
> FMO03621.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGGACAACACCTGGGTGC
ACTCGTCTCCATACAGCCCCCTGCCCCCATACGCGGTTATCGGTGGCCAT
GACTCGGACCGCACGCCCATCTATGTGGGTCGATCCTTTCACGAAGGCGA
GAATCTTCCCGCCAAGGTCGTACCGAGCAAGGGATGCGCCTATGTGGCCT
ACGGTGGTGCGGAGCACACGAAGACGCACTACGAGGTGCTGGTGGGTCAG
GGATTTGCCTGGGTGCCCAGTTCCAGCGGTGGAGTGCCACCGAATGCGGT
GAGGAGCGGAACGACGCGAACGGGCGAGCCGCTCTATGTGGGACGCGGAC
ATCATGCCGGAAGCTTGACTGTGGGCAAAGTTCATCCATCGCACGGCTGC
CTATACATTCCATTTGGCGGCCAGGAGGTGCGCATCAACACCTACGAGGT
GCTCATCAAGCAGCAGCACGACGTCTGGGTACCGGCCTCGCCCAGTTACA
CTCCTCCGGGCGCAGTGATCGCCGGACACGACTCCGACCGTACTCCCATT
TACGCCGGAAGGGCAATGCACGAGGGTGAAATGCTGCCTGCCAAGGTGGT
GCCGAGCAAGGGAACCGCCTACGTTTGCTTCGGCGGATACGAATTCCAGA
AGCCCAGCTACGAGGTGCTCACTGGCTACAGATATGTATGGATGAAATTG
CGGCCACAGCATTCCACCAAACGCCGTAACCACGGGTCGTGCTCGCAATG
GAGAGCTGCTGTACTATGGGCGAGGACACTACCAGGGCAGTTTGACACCG
GGGTCTGATCTCGGGCCAGCCAGCGTTGCCTCTATATTCCGTACGGAGGT
CGGGAGATTCGCATCAACTCGTACGAGATTTCTCTGCAGACAAGCAAGCT
TTCTAGACCAT
FMO03621.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44250-RB | 1067 | CG44250-RB | 118..975 | 32..893 | 4195 | 99.4 | Plus |
| CG44250-RC | 1100 | CG44250-RC | 154..1008 | 35..893 | 4180 | 99.4 | Plus |
| CG32633-RB | 956 | CG32633-RB | 794..864 | 362..432 | 190 | 84.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12950496..12951350 | 893..35 | 4080 | 99.4 | Minus |
| X | 23542271 | X | 13562712..13562782 | 362..432 | 190 | 84.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:20 has no hits.
FMO03621.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:21 Download gff for
FMO03621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44250-RB | 118..981 | 32..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:41 Download gff for
FMO03621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3884-RB | 111..974 | 32..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:31 Download gff for
FMO03621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44250-RB | 118..981 | 32..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:31 Download gff for
FMO03621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12950490..12951352 | 31..900 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:21 Download gff for
FMO03621.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8837995..8838857 | 31..900 | 98 | | Minus |
