Clone FMO03626 Report

Search the DGRC for FMO03626

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:36
Well:26
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14568-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03626.5prime Sequence

560 bp (560 high quality bases) assembled on 2008-08-11

> FMO03626.5prime
GCATACATTATACGAAGTTATCAGTCGACATGGCCCACAAGTTCATCTGC
TCCCTGCTCCTGATCGCAGCCATGGCTGCCGTTTCTGTTGCAGAGCCTAC
CAGATTCCGGGGACGATTTTCCCGCCTGCAGTTTGCCCGTCAGGAGCAGG
CTCCAGGGGATCAGGCAGTTCCGGCCGACCCCGCCGTGGATATTGCACCT
ACGCCGGCCTCAGCCCCTTATCCGCCAGCAGGAGTGACACCGGAGGTGCC
CTTCGACCTGCCCACGGAGACTGAAGCGCAACCTGATCTTACCTACGGAC
CCCCAGATGAGCCCGACAACACCTACGGCCCTCCCGATAACACTTACGGA
CCACCTGCTGAGCCGGAAAACACCTATGGACCGCCGGCTGATGGCCCAGT
GGACCAGGCCCCTGCTGCCGATCCCGTGCCCGCCGGCTTGATCCAGCCTC
GTAACGAACGCCTCCTCAGTCGTCGTCCGACCCCAGAGAAGCTTCGATCC
GCTCAGATTATCCGCTCTGGATCAGTTCTGGTGTACACCATCGCAAGCTT
TCTAGACCAT

FMO03626.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14568-RA 682 CG14568-RA 34..548 28..542 2575 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21732940..21733454 542..28 2575 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:16:11 has no hits.

FMO03626.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:28 Download gff for FMO03626.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14568-RA 22..552 16..546 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:33 Download gff for FMO03626.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14568-RA 19..549 16..546 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:42 Download gff for FMO03626.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14568-RA 22..552 16..546 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:42 Download gff for FMO03626.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21732935..21733466 16..546 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:28 Download gff for FMO03626.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21726035..21726566 16..546 98   Minus