FMO03630.5prime Sequence
894 bp (894 high quality bases) assembled on 2008-08-11
> FMO03630.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCAGCAACAA
CACGGACACTGGGGACACCACCGTCATGGCGACGGCTACCTCGGTGCAGA
ACGATGTCGAGGCCGGCGTAGATGAGCAATTGCCTCGAGAATCGCTGATA
ACCACTGCAGTCAGTTTTCTACAAAACACCAAGGTGCGCCACACGACACT
TATCCAGAAGCAGCAGTTCCTACGGTCCAAAGGTCTCACCGCTCACGAAA
TTCAGCTGGCCTGTGAACGGGCCGGCGTTTTCACCCAAGACCCCAACAAG
CCCAATCCGAATCCGAACACCGTCATTAGCATTGGATCCCAATTGCACGC
GCTGCAGCCGCAGCCGACTGTCTTGGGCCGGATCAGGGAAATCATCCATT
CGGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACATCTTCTGGAAG
CAATACATTGCGCCCTACCTGTTCGGCAAGTCCAAGAAGAAGGCGGTCGA
TGAAGTCCTGGACGACATAGACAAGAAGGTAGAGACCCGCACCAACGACC
TCAACAAGGAGATTTTGGCGGTCAGGGATCTGATCACCACACAGCAAAGG
GAACACGCCCAGCAGCTGAACCGCGAATTTAGTAACTTCCGTAGCGATCT
GGATGCCATTAAGGGCCTGCTTTTGAACCGAAAACAGTTCGCCGGCCCTG
TGGCTCCGATCGCAGTGCCATCCATTCCCGCCTGGCAATTGGCCGGCTCA
CCGCATCACCATCACCGGCACAGCGGGTCGGACGACAACGAGAAGGGCGA
TGATGCTGGATCCGGGTCTGGCTCGTCGGAGACAGAGGTGGTCACCAAGA
ATAGTGACTCCAGCTTGGAGATCATGGCAAGCTTTCTAGACCAT
FMO03630.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex14-RA | 1249 | CG4289-RA | 135..974 | 37..876 | 4200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20779676..20780103 | 449..876 | 2140 | 100 | Plus |
| 3L | 28110227 | 3L | 20779098..20779405 | 143..450 | 1525 | 99.7 | Plus |
| 3L | 28110227 | 3L | 20778933..20779047 | 37..151 | 560 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:35:25 has no hits.
FMO03630.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:00 Download gff for
FMO03630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex14-RA | 135..977 | 37..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:54 Download gff for
FMO03630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4289-RA | 139..981 | 37..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:30 Download gff for
FMO03630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex14-RA | 135..977 | 37..880 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:30 Download gff for
FMO03630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20779103..20779405 | 148..450 | 100 | -> | Plus |
| 3L | 20778933..20779043 | 37..147 | 100 | -> | Plus |
| 3L | 20779678..20780106 | 451..880 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:00 Download gff for
FMO03630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20772778..20773206 | 451..880 | 99 | | Plus |
| arm_3L | 20772033..20772143 | 37..147 | 100 | -> | Plus |
| arm_3L | 20772203..20772505 | 148..450 | 100 | -> | Plus |
