FMO03634.5prime Sequence
637 bp (637 high quality bases) assembled on 2008-08-11
> FMO03634.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCAAGCAAAAA
AGGCCAAGCGACCCTCGGGCCTTTCGAAGGATGAAACTTGGAAGAAACTG
GGCTTTCTACCCGCGTTCAAGGGCGGCAAGGATGGGGAGCCGAAGAAGTA
CCGAGCGCTGTGCACCCACTGTCGGAAATGCCAATCAAACACCAGCATAG
ACAGGCTGATTATCCATAGGAAGTCATGTCTCAAGTTCCGGGAGGATCTA
ACCGCTGAATTCGGTATTAAGGTGGAGGCTACGGACGCCGCTCCGGCAGA
ACAGAGCTCTTCCGGCTCCACAATTGACTTCACTTCGAATATTCTACTGG
ACAAACTGATCGACGAGGATGATAGCAGTGCACGCAATCAGGAATCCAAC
TTGGTGAGCTACTTGACCGATCTGGATCAACTGGTGATCCCGTCATCCGA
CGCCAATCGACTGCAGAAGGATCTGATCAAGGCGGAAACGGAGTATCTGG
TGGTCAAATCCGAGTACTTTACCAAGATGAACGAGATATCCGAACTGAAA
CGCACCGTCACCTTGTTGGAGGCGAAAAAGACACAGCTGGAGATCGCCAA
ACTGCGTGCTGAATGCGAGGCAAGCTTTCTAGACCAT
FMO03634.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ibf2-RA | 708 | CG9740-RA | 62..646 | 35..619 | 2925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9257789..9258190 | 619..218 | 2010 | 100 | Minus |
| 3R | 32079331 | 3R | 9258255..9258440 | 220..35 | 930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:37:54 has no hits.
FMO03634.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:13 Download gff for
FMO03634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9740-RA | 56..659 | 29..628 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:04 Download gff for
FMO03634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9740-RA | 15..618 | 29..628 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:34 Download gff for
FMO03634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ibf2-RA | 56..659 | 29..628 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:34 Download gff for
FMO03634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9257776..9258188 | 220..628 | 99 | <- | Minus |
| 3R | 9258256..9258440 | 35..219 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:13 Download gff for
FMO03634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5083498..5083910 | 220..628 | 99 | <- | Minus |
| arm_3R | 5083978..5084162 | 35..219 | 100 | -> | Minus |
