FMO03635.5prime Sequence
427 bp (427 high quality bases) assembled on 2008-08-11
> FMO03635.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACACCCTTTG
ATGACTTTGTCTATCTAATCAATCATGTGCTGCTGGGCGAGGAGCCGACC
ATCGAGGACTTCATACTGCTGGTAGGCACCCTGGTGGCATTTATAGCATT
TATCCTTTGGTGCTGCTTCCCCATACAACCTAAGCAGGAGCGTGGCCCCC
ATCGCCAATTCACCTGCAAGATTATCCAGAATCCCATTAAGGCCTTTGAC
GCCTCCACCAGCACCGACGACGCACCCATTCCGGGAGGTGGCTCCGGAAT
TGGCAGCTCCATGTCCAACATGCAGTACAATGGTAGCGGAAGCTATAGCA
AGAATGGTACTGTTGCCATGCACAATTACTACGTTAAGAACGGTCACCAT
TGCTGCACCGCAAGCTTTCTAGACCAT
FMO03635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17163-RA | 1716 | CG17163-RA | 581..952 | 38..409 | 1860 | 100 | Plus |
| CG17163-RB | 1451 | CG17163-RB | 207..575 | 38..409 | 1805 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 23081635..23081861 | 409..183 | 1135 | 100 | Minus |
| X | 23542271 | X | 23081916..23082003 | 184..97 | 440 | 100 | Minus |
| X | 23542271 | X | 23082070..23082129 | 97..38 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:58:56 has no hits.
FMO03635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:32 Download gff for
FMO03635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17163-RA | 568..955 | 23..413 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:05 Download gff for
FMO03635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17163-RA | 567..954 | 23..413 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:11 Download gff for
FMO03635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17163-RA | 568..955 | 23..413 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:11 Download gff for
FMO03635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 23081632..23081859 | 185..413 | 99 | <- | Minus |
| X | 23081916..23082002 | 98..184 | 100 | <- | Minus |
| X | 23082070..23082142 | 23..97 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:32 Download gff for
FMO03635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| XHet | 60450..60677 | 185..413 | 99 | <- | Minus |
| XHet | 60734..60820 | 98..184 | 100 | <- | Minus |
| XHet | 60888..60960 | 23..97 | 93 | | Minus |
