FMO03638.5prime Sequence
475 bp (475 high quality bases) assembled on 2008-08-11
> FMO03638.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGTGAATCCG
CACCGGAAACTGTGCCAGCCAAGAAGCCGGCAAAGGCCAAGAAGGCGGCA
AAGCCGGAGAACAGCATACCACGCGGCCAGCCCAAGTCGAACCGGCCGTG
GAAGACGCCCAAGCAGAAATTTAGCAAGATTAAGAAGACCGTTAACCGAC
TGTCCTTCTAAAAGAAGACGGCCCTGCGCGACGAGCTGCGCTACATCAAG
GAGCGCTCCAAGGAGATCAAGGACAAGCGCAAGGAGGATGCCGTCCAAAA
GCACCAGCGCCGCGTGGAGAATGCCGAGCGCCGGCTGGCGAACGAGCGCC
GCTCGGAGGTCGTCCAGGTCATCAAGAATCCCGCCAAGCTGAAGCGCATG
AAGAAGAAACAGATGCGCATGATCGAGAAGCGGGACGTCAGCCAGGTGAA
GGTGGTCGCAAGCTTTCTAGACCAT
FMO03638.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14210-RB | 559 | CG14210-RB | 81..500 | 38..457 | 2085 | 99.8 | Plus |
| CG14210-RA | 567 | CG14210-RA | 81..500 | 38..457 | 2085 | 99.8 | Plus |
| CG12788-RC | 1704 | CG12788-RC | 1609..1704 | 457..362 | 480 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19616470..19616758 | 169..457 | 1430 | 99.7 | Plus |
| X | 23542271 | X | 19616276..19616406 | 38..168 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:08 has no hits.
FMO03638.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:47 Download gff for
FMO03638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14210-RA | 81..500 | 38..457 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:26 Download gff for
FMO03638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14210-RA | 70..489 | 38..457 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:59 Download gff for
FMO03638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14210-RA | 81..500 | 38..457 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:59 Download gff for
FMO03638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19616276..19616406 | 38..168 | 100 | -> | Plus |
| X | 19616470..19616758 | 169..457 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:47 Download gff for
FMO03638.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19510309..19510439 | 38..168 | 100 | -> | Plus |
| arm_X | 19510503..19510791 | 169..457 | 99 | | Plus |
