FMO03639.5prime Sequence
1003 bp (930 high quality bases) assembled on 2008-08-11
> FMO03639.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGAGCCCAACGA
TGAGGTGGTGGAGCGACAGAAGCTGGTGAACGACGTGGAAACGGAGGAGG
AAGCCCAAAGCGCACCGAAATCGGCCACACCCGCCTCGCCCGCCGTTCCG
AATATCAAAATCAAAGGCATATCCAGCGGCGAGACCACTCGCAGCAGAAA
CTCGGCCTCCTGCTCCATCGAGAGGACGATATCCGAAAAGGAGAAGGACA
AGAGCCAGGGCCAGGGTCAAGCGGCCACCAAGGTGACCTATGTGAATGAG
CGCCGGCCACGCCCGCAGGCGCACGGCGGCAGTGGCGGGGGTGCCGGCGA
CGAAAGATTCGAGTTCAAGACCCGGCCGCGCAAACTCCTGAAAGATCGTG
ATGAGTTGGAACCCACCACCAACAGTGCCAACAGCCTGAACGCCATCACC
TTGGTGAGCAGCGAGTGGCTAGCACCTGATCCCACAGCCACAGACAATCA
CAACACCCCCAAGAACAACAACAACGATAGCACGAAACCCAACAATAACA
ATCAGCACAGCAATAGCAATCAGAACACACCGCGATTGCAGCGCCGCAAG
AATCCCACAGCGTCGATGCCAAACGCCAGTGCCCACAGCGATAAGTTCGA
CGATCGTCCAATAAAACATCATTCCTTTGTCTCCGAAGTTCCCGATGTTA
AGCACATGGAAAGAGCTCTCCTCGGACTGCTGGACGACTTTCACTCCGGC
AAGCTGAGGGCATTCGGCTCCGGCTGCACAATGGACCAGATGACCAAGAT
TCGCGAGCAGCATGAGAGCCTGGCCAAATTGCATTTCGAACTGGCTGCCG
CCGAGGAGGATTCGCTGGAGCACGGCAACGAGTTCAACACCAACAAGGCG
CAGAGAACATGCTGCAGCTGATGCAGCTGTCTGGAACAGCTATCCATCTC
CATCGAGCAGCTGCATGACGAGCCACACTGGTCTCGCAAGCTATCTAGAC
CAT
FMO03639.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10874-RA | 1583 | CG10874-RA | 124..1071 | 37..985 | 4630 | 99.4 | Plus |
CG10874-RD | 1586 | CG10874-RD | 124..1074 | 37..985 | 4590 | 99.1 | Plus |
CG10874-RC | 1292 | CG10874-RC | 124..481 | 37..394 | 1790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2190706..2191080 | 767..393 | 1875 | 100 | Minus |
2L | 23513712 | 2L | 2191850..2192090 | 394..154 | 1205 | 100 | Minus |
2L | 23513712 | 2L | 2190426..2190644 | 985..766 | 910 | 97.3 | Minus |
2L | 23513712 | 2L | 2192147..2192263 | 153..37 | 585 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:34:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2474 | 414..569 | 201 | 62.7 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 2492..2681 | 383..569 | 176 | 57.6 | Plus |
FMO03639.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:31 Download gff for
FMO03639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10874-RA | 115..1071 | 27..985 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:06 Download gff for
FMO03639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10874-RA | 101..1057 | 27..985 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:03 Download gff for
FMO03639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10874-RA | 115..1071 | 27..985 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:03 Download gff for
FMO03639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2190707..2191078 | 395..766 | 100 | <- | Minus |
2L | 2191850..2192090 | 154..394 | 100 | <- | Minus |
2L | 2192147..2192272 | 27..153 | 97 | | Minus |
2L | 2190426..2190643 | 767..985 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:31 Download gff for
FMO03639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2190426..2190643 | 767..985 | 97 | <- | Minus |
arm_2L | 2190707..2191078 | 395..766 | 100 | <- | Minus |
arm_2L | 2191850..2192090 | 154..394 | 100 | <- | Minus |
arm_2L | 2192147..2192272 | 27..153 | 97 | | Minus |