FMO03652.5prime Sequence
437 bp (437 high quality bases) assembled on 2008-08-11
> FMO03652.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCACGCATCT
CGTTGCCCGGCAGCAGCCTGCTGGTAGTCCTGGCACTGATCCTGTGCCTC
AGCCTTCCAATCCGGGCGGTGCCCACCTCCGTGCTCGCCCAAGACACGGA
GCTCTCCACCAGCGCCAACCACAAGCTCCAGCAGCAGCAGCAACAGCAGC
AGCAGCATCACCAGCAGCAGCAGCTCCAGCAGCAGCAGCAGCAGCAACAG
CCGGCCACAGCCAAACGCTCCGAGGAGGCGAGTGCCGTGCCCACGGCGGA
CAAGAAGTCGAGTCCGGAAATTGTGCCCGCTTCCTTTAGCAACGCTCCGT
CGGCCCGAAACAGCCCAGTTCCGGTCTCCAGCCAGCAGCAGGAGCAGCAG
CAGGTGCCGTCCGGAGTCTACGCCCTGCCCTCCAACG
FMO03652.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4577-RB | 2707 | CG4577-RB | 165..566 | 36..437 | 2010 | 100 | Plus |
| CG4577-RA | 2536 | CG4577-RA | 165..566 | 36..437 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1134857..1135081 | 36..260 | 1125 | 100 | Plus |
| 2L | 23513712 | 2L | 1138618..1138797 | 258..437 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:26:42 has no hits.
FMO03652.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:42 Download gff for
FMO03652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4577-RA | 161..566 | 32..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:53 Download gff for
FMO03652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4577-RA | 152..557 | 32..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:38 Download gff for
FMO03652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4577-RA | 161..566 | 32..437 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:38 Download gff for
FMO03652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1134853..1135081 | 32..260 | 99 | -> | Plus |
| 2L | 1138621..1138797 | 261..437 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:42 Download gff for
FMO03652.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1134853..1135081 | 32..260 | 99 | -> | Plus |
| arm_2L | 1138621..1138797 | 261..437 | 100 | | Plus |
