FMO03654.5prime Sequence
584 bp (584 high quality bases) assembled on 2008-08-11
> FMO03654.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGAGCCAAGGGA
TTGTTGAAGGAGTACGAGGTCGTGGGCCGCAAGCTGCCCAGCGAGAAGGA
GCCCCAGACTCCCCTCTACAAGATGCGCATCTTTGCCCCCGACAACATCG
TGGCCAAATCCCGCTTCTGGTACTTCCTGCGCCAACTGAAGAAGTTCAAG
AAGACCACCGGCGAGATCGTGTCCATCAAGCAGGTGTACGAGACGTCGCC
CGTGAAGATCAAGAACTTCGGCATCTGGCTGCGTTACGATTCCCGCTCGG
GCACCCACAACATGTACCGCGAGTACCGTGACCTGACTGTCGGCGGTGCC
GTCACTCAGTGCTACCGCGACATGGGAGCCCGCCACCGTGCCCGTGCCCA
CTCCATCCAGATCATTAAGGTGGACTCGATCCCTGCCGCCAAGACCCGCC
GCGTGCACGTGAAGCAGTTCCACGATTCAAAGATCAAGTTCCCTCTGGTC
CAGCGTGTCCACCACAAGGGCAACAGGAAACTGTTCTCGTTCAGGAAGCC
CAGGACCTACTTCCAGGCAAGCTTTCTAGACCAT
FMO03654.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL18A-RA | 635 | CG6510-RA | 35..567 | 34..566 | 2665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17546474..17546987 | 566..53 | 2570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:47 has no hits.
FMO03654.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:03 Download gff for
FMO03654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL18A-RA | 35..574 | 34..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:29 Download gff for
FMO03654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL18A-RA | 67..606 | 34..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:38 Download gff for
FMO03654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL18A-RA | 35..574 | 34..574 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:38 Download gff for
FMO03654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17546467..17546986 | 54..574 | 99 | <- | Minus |
| 2R | 17547409..17547428 | 34..53 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:03 Download gff for
FMO03654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13433972..13434491 | 54..574 | 99 | <- | Minus |
| arm_2R | 13434914..13434933 | 34..53 | 100 | | Minus |
