Clone FMO03655 Report

Search the DGRC for FMO03655

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:36
Well:55
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15382-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03655.5prime Sequence

525 bp (525 high quality bases) assembled on 2008-08-11

> FMO03655.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTACCGCAT
GTTGAATAAACGCAAACAGGCGACTCCCTCGCCAGTAAGAGATTCCGACG
CAGCCGACGTAGCCATGGCCAACCACAGTGCTCTGGAACTGGAGGCGGCT
GCGGCTCTCTTGTTGCTCCGCTACCAATACGATCGACAAGTGTGCAATAA
CATTATAACCTACACGGAGTCCTGTTCCCCGACTCCACCGCCGGCAGTTG
CTGACAACACGACGCCAAAAGATCAGACTGTTCGTCCGCCAGTCGCCAGC
CAGCCGCTGAAGAAGCGCTCCATACCATCGCACATCCTCCGCAGATCCCT
GACTCCGGCCAAATCCGAGACTTCAGTGAGCAACAAGTCGATAGTCAAGG
CCAAGACGAGGACTCCAATTCCCAGTAAGGAGCGAAACTGCAACAGGACC
TTGCTTAAGTCCTGCAGAAATATGATTCGAGAGTTTTTGGACAATCAGGA
GTTTATCGCAAGCTTTCTAGACCAT

FMO03655.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15382-RA 1038 CG15382-RA 30..501 36..507 2360 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2155782..2156253 36..507 2360 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:27:02 has no hits.

FMO03655.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:49 Download gff for FMO03655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15382-RA 21..504 29..511 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:55 Download gff for FMO03655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15382-RA 14..497 29..511 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:49 Download gff for FMO03655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15382-RA 21..504 29..511 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:49 Download gff for FMO03655.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2155773..2156256 29..511 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:49 Download gff for FMO03655.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2155773..2156256 29..511 98   Plus