FMO03666.5prime Sequence
521 bp (521 high quality bases) assembled on 2008-08-11
> FMO03666.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGAGGCGA
GGACTCCTACTAATGGGCCAGTGCATGCCCTGCATCAAGCAGAACGCCTC
CAAGATCCGCATTCGCCGAATGGAGCTGGACAAGAACCTGAATATGTACT
TTAAGAAGGACGAGTTCTACTTCGCCCACGATCCGCAGAAGGTGTGCAAG
ACCGGGGACGTGGTCCTGATACGGGAACTGCCAGAGCGCCTCACCCGCCT
CATCACGCACAACGTGGAAAAAGTGGTCTATCCGCTGGGTGACATAACGG
ACCCGCTCACTGGCAAGAAGGTGGTCGTGGGCAATTACCGCGAGGACATC
GAGATGGCCAACCAGCTGTTCGGCAAGTCAGAGAAGGCCTTCGACTACGA
GAAGGCACCGCCCCGCGGTCGCCTGGAGGGAACCAAGGACTTCACCCACG
GGGAAACATACATCAAGTACCACGAGGATGGCAAGGATCAGCCGTTCGCC
GTTGCAAGCTTTCTAGACCAT
FMO03666.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS17-RA | 713 | CG4326-RA | 75..539 | 39..503 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24173839..24174196 | 503..146 | 1790 | 100 | Minus |
| 2R | 25286936 | 2R | 24174260..24174367 | 146..39 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:33:34 has no hits.
FMO03666.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:30 Download gff for
FMO03666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS17-RA | 67..546 | 27..510 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:43 Download gff for
FMO03666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS17-RA | 63..542 | 27..510 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:34 Download gff for
FMO03666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS17-RA | 67..546 | 27..510 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:34 Download gff for
FMO03666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24173832..24174195 | 147..510 | 99 | <- | Minus |
| 2R | 24174260..24174375 | 27..146 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:30 Download gff for
FMO03666.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20061355..20061718 | 147..510 | 99 | <- | Minus |
| arm_2R | 20061783..20061898 | 27..146 | 95 | | Minus |
