FMO03667.5prime Sequence
1132 bp (1050 high quality bases) assembled on 2008-08-11
> FMO03667.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCCTGAAAG
TTTTTCTAGTCCTAGCTTTGGCTCTATCGTCCTGCCAAGCGCTTCCCTAT
GTATCCTATGATGATGTTGACGATACGGAGGTCATCGAGCTGCCTGGAAA
TGGAATCGAGGAGATACCACCCACTCTTGGCAAGGATATCATCGACCTGA
CACCATTGGGAACGGCGCTCTTTGGCAAACCGGATGAGGAGCTAACGGCG
AATCGTGTGGGTAACTTTAGTGCGGATGCAGATGAGATGAATCCTGAGGA
ACTGGGCAGCTATCTGGAGGGTGATATGCTGGTGCCGCAAACGGATCTGA
TTATGAAAAATGGACTGCCCACTCAGTCCTCCCGTTGGCCAAATGGTGTG
GTGCCATATGAAATCCGAGGAAACTTCAATGCCAGAGATATGGCCACAAT
TGAAAATGCCATTGGTGAGTACCATCGTCGGACGTGCATTCGGTTTGTGA
AGCGCAGCTCTGAGCGGGACTACATCTCCATTCGCGGCGACAACTCCGGC
TGTTGGTCCTCCGTTGGTCGAGTGGGTGGCAAGCAGGAGGTGAACCTACA
GTCTCCCGGCTGTCTCAGCCGTCCAGGAACCGCCATGCACGAGCTGATGC
ACGCCCTCGGCTTCCTTCATGAACAGAACCGTATGGAGCGCGATGGTTAT
GTGGCCATCCAGTACAACAATGTCCAGTCCTCGGCGATGAACAACTTCGA
AAAGGCCGCCCGCACGGAAGCCTTTGGGGTGCCCTACGACTATGGCAGCG
TGATGCACTACTCCAAGAACGCCTTCTCCATCAACGGACAGCCCACCATA
CTGGCCATGCAAGCCAATGGCGCCGATAAAATGGGCCAGAGGAATGGTTT
CTCCGACTACGATATCCAGAAGCTGAATCGTATGTACGATTGTGGCACCG
TCAACGCTGTTCCAGTTGCCCCAAGATTACCCGCCCCTGCTCCTGCTCTT
GCGCCCCTGCTGGCAGTGCATCCGATGTAGATAGCTTCATCGCGGCCTGA
TCAGCGAATTGGATGGCATGAAAAGAGGAAACCAGTCAGCAAGCTTTCTG
AACATTCGTTGCGCGCGGCCCAGTAAATGCAT
FMO03667.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6763-RB | 1275 | CG6763-RB | 74..1132 | 38..1086 | 4995 | 98.7 | Plus |
| CG6763-RA | 1974 | CG6763-RA | 773..1831 | 38..1086 | 4995 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23284774..23285595 | 38..859 | 4110 | 100 | Plus |
| 3R | 32079331 | 3R | 23285661..23285869 | 859..1062 | 770 | 95.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:32:55 has no hits.
FMO03667.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:40 Download gff for
FMO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 773..1820 | 38..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:54 Download gff for
FMO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 773..1820 | 38..1076 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:53 Download gff for
FMO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6763-RA | 773..1820 | 38..1076 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:53 Download gff for
FMO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23285662..23285887 | 860..1076 | 94 | | Plus |
| 3R | 23284774..23285595 | 38..859 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:40 Download gff for
FMO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19110496..19111317 | 38..859 | 100 | -> | Plus |
| arm_3R | 19111384..19111609 | 860..1076 | 94 | | Plus |
