FMO03670.5prime Sequence
452 bp (452 high quality bases) assembled on 2008-08-11
> FMO03670.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACAGCGATTTG
AAAGCCAAGGTCGAGAGCTGCGCCCGTACGGCGGATACCTTCACACGCCT
GTACTACGCCTCCGTGGACAACCGACGCCAACAAATTGGACGCCTCTATT
TGGACAATGCTACGCTTAGCTGGAATGGAAACGGGGCCATCGGCCGCCAG
ATGATCGAGAGCTACTTTCAGGAGCTGCCATCCTCAAACCACCAGTTGAA
CACCCTGGACGCGCAGCCTATTGTGGATCAGGCTGTGTCCAACCAGCTGG
CCTACCTCATCATGGCCAGCGGCTCCGTCAAGTTCGCAGATCAGCAGTTA
CGCAAATTTCAGCAGACTTTCATCGTTACCGCCGAGAATGATAAATGGAA
GGTCGTCTCCGATTGCTACCGAATGCAGGAGGTCGCAAGCTTTCTAGACC
AT
FMO03670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nxt1-RA | 527 | CG12752-RA | 26..426 | 34..434 | 2005 | 100 | Plus |
| Nxt1-RB | 540 | CG12752-RB | 26..439 | 34..434 | 1865 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23811422..23811724 | 434..132 | 1515 | 100 | Minus |
| 2R | 25286936 | 2R | 23811795..23811881 | 131..45 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:16:41 has no hits.
FMO03670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:36 Download gff for
FMO03670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nxt1-RA | 26..426 | 34..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:34 Download gff for
FMO03670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nxt1-RA | 25..425 | 34..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:55 Download gff for
FMO03670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nxt1-RA | 26..426 | 34..434 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:55 Download gff for
FMO03670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23811422..23811724 | 132..434 | 100 | <- | Minus |
| 2R | 23811795..23811881 | 45..131 | 100 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:36 Download gff for
FMO03670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19698945..19699247 | 132..434 | 100 | <- | Minus |
| arm_2R | 19699318..19699404 | 45..131 | 100 | == | Minus |
