FMO03672.5prime Sequence
399 bp (399 high quality bases) assembled on 2008-08-11
> FMO03672.5prime
TATAGCATACATAATACGAAGTTATCAATCGACATGAGTGCCGTGAACGA
TCCGCTGGAACTTTTGACGAACAAGGGCACCCACGAGCCTTCTTTCCTCT
CGCCGATATGGAATCCGATTGCCTGCGGTGTGGCCGGCGTGGGCGCGGCC
ATTTTCATCAACTGGGGCTTCCGTAAGCCCGTGTTTTCCGGCATCCAGAA
GCACATCGCCTTCGGAGCTATCGGCGTCGGCGCAGGAGCTTATTTCGATC
AGAAGAGGAACGAGTACCTGGCCAAAAGGGACGCCGTCCTCCGGCACTAC
ATCGAACTGCATCCCGACGATTTCCCGGTGAAGGAACGCAAGACCTATGG
CCAAGTGCTGGAGAGTTGGGTGCCAGTGCGCGCAAGCTTTCTAGACCAT
FMO03672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12400-RB | 762 | CG12400-RB | 159..512 | 28..381 | 1755 | 99.7 | Plus |
| CG12400-RA | 458 | CG12400-RA | 32..385 | 28..381 | 1755 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3145527..3145690 | 191..28 | 805 | 99.4 | Minus |
| 2L | 23513712 | 2L | 3145305..3145449 | 334..190 | 725 | 100 | Minus |
| 2L | 23513712 | 2L | 3145203..3145250 | 381..334 | 240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:35:46 has no hits.
FMO03672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:10 Download gff for
FMO03672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12400-RA | 32..389 | 28..386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:33 Download gff for
FMO03672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12400-RA | 30..387 | 28..386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:37 Download gff for
FMO03672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12400-RA | 32..389 | 28..386 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:37 Download gff for
FMO03672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3145200..3145249 | 335..387 | 92 | <- | Minus |
| 2L | 3145305..3145448 | 191..334 | 100 | <- | Minus |
| 2L | 3145528..3145690 | 28..190 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:10 Download gff for
FMO03672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3145305..3145448 | 191..334 | 100 | <- | Minus |
| arm_2L | 3145528..3145690 | 28..190 | 99 | | Minus |
| arm_2L | 3145200..3145249 | 335..387 | 92 | <- | Minus |
