FMO03675.5prime Sequence
512 bp (512 high quality bases) assembled on 2008-08-11
> FMO03675.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGCAATCCCAA
ATCCTAAGAAACCTATGCCTCATTGTGGTTGTAAGCTCGATGGCAGTTCT
GGTCCAAGGAGTGTGCAACAGTTGCCAAGCCAACAATGTGAAATGCCTGA
ATGAAACGCACTATAGCTTTTGCTCCGATAATGTGGCGCCCAATCAGGTC
CTTCAGTGTCCGGATAACAAGGTCTGCACCGACCTGGCAATCATCTGCAT
GGACAGCAGTGTAGTGGATAGCTCCTGCTCAGGCACTGCCGATGGATCCT
GCCCCACCTGCGATGGAAACAGCATGTTCGTCTGCACCAGTCGCACCACC
TTCCAGATGTGCGATGGCACCAACCTAACTGGCCAGGTCACCAAGTGCAA
GGACAACAAGATCTGCTCGATTAAATCGGGCAAATACTGCGTGGATCTCT
GCGAAGTGGGTGATTCCGTCGAATGCGATAGGGACAGTCCGCTAGCAAGC
TTTCTAGACCAT
FMO03675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13311-RA | 568 | CG13311-RA | 37..495 | 36..494 | 2295 | 100 | Plus |
| CG32023-RA | 525 | CG32023-RA | 302..403 | 327..428 | 180 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8801613..8802041 | 494..66 | 2145 | 100 | Minus |
| 3L | 28110227 | 3L | 8803724..8803825 | 428..327 | 180 | 78.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:40 has no hits.
FMO03675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:17 Download gff for
FMO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13311-RA | 29..504 | 27..503 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:05 Download gff for
FMO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13311-RA | 27..502 | 27..503 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:00 Download gff for
FMO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13311-RA | 29..504 | 27..503 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:00 Download gff for
FMO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8801608..8802041 | 66..500 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:17 Download gff for
FMO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8794708..8795141 | 66..500 | 98 | <- | Minus |
