FMO03679.5prime Sequence
669 bp (669 high quality bases) assembled on 2008-08-11
> FMO03679.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGGCTCTCATTGACAC
CGCCTGGCGTTGTCGCCTCATGATCTTCGTTATCGTCTCGCTGCTCCTTG
TGGGCGATCTTTTTGGATACGGCGGCGGCATGAAGTCCAACCACCCCAAT
CCGCACTCGGTAAGATCGGCGCGGGGCGCGGTGCCGGGTGGTGCCCCAAC
GGGTCCGGCGGCTGCAGCGGCCAGCAAGTTCCAGACCAAAAATGCCGAAA
TCGACATAACTGAAGAGCACGATTTCAATGAACTCTCAGCAGCAGCTCAA
TCCCTCAAGCCTGGAATGGCAGTGGTTACTGGGGCTAGTCTGAAGACCAA
GTCCCAACTCACGGACGCCATCAAGGAATCATGTCTCCCCAAGATGCTCT
GCGAACTGGCCTCCAAGGCGGATTACCAACTCAGCGAAAAGGAGCGGGAA
CTGCTAAGACTGATCAGATCTCCAACAATGCCCTGGATGATGAACATGCC
GCCGAGCAAATGGTATTTTGCGGCCCACATGGGCGAACTCATGCGTCACA
CTGGCGACAATCTCAGCGGACCTATGGGGTGCGCCAATCTCTGGCCAAAT
TGCCCGATCAGCTCCAAGAAGCTGATGAAGCTCAGCTACAAAGTGAGGGT
CGCAAGCTTTCTAGACCAT
FMO03679.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gk-RB | 1318 | CG13695-RB | 388..1005 | 34..651 | 3075 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18139789..18140020 | 34..265 | 1160 | 100 | Plus |
| 3L | 28110227 | 3L | 18143500..18143703 | 264..467 | 1020 | 100 | Plus |
| 3L | 28110227 | 3L | 18144919..18145105 | 465..651 | 920 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:13:24 has no hits.
FMO03679.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:37 Download gff for
FMO03679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gk-RB | 388..1009 | 34..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:56 Download gff for
FMO03679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gk-RB | 386..1007 | 34..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:26 Download gff for
FMO03679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| gk-RB | 388..1009 | 34..657 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:26 Download gff for
FMO03679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18139789..18140020 | 34..265 | 100 | -> | Plus |
| 3L | 18143502..18143703 | 266..467 | 100 | -> | Plus |
| 3L | 18144922..18145109 | 468..657 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:37 Download gff for
FMO03679.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18132889..18133120 | 34..265 | 100 | -> | Plus |
| arm_3L | 18136602..18136803 | 266..467 | 100 | -> | Plus |
| arm_3L | 18138022..18138209 | 468..657 | 97 | | Plus |
