FMO03682.5prime Sequence
1223 bp (1021 high quality bases) assembled on 2008-08-11
> FMO03682.5prime
AGCATACCTTATACGAAGTTATCAGTCGACATGCTGCGCAAGTCAAAGAA
ACAGCCACAGACGGTGGCCGAGAAGGTCAGCAAGCTGCTTGCCCATCCGA
ACGAGAGCGACAGCGCAGAGGACTCGGACTTCGATGTGGCCACAGGGCCA
CGTCTGGTGGACTTCGAGGAGGAGGAGTACGACCTGCCGGATGCCCGGAG
CACCGACTTTAGGAAGAGGAACGTCAAGCTGCTCTCGGAGCAGAGTGACC
GCTACAAAGGAAAGATCAGCAGTCGCAAGGAGTTGGATGACGATGAGGAT
AAGGATGATGAACAAGAGGTGTCCTACGAAGAAAGCGATGAGGATGATGA
GAACTTGACAAACTTTAAGCAGAAGTTAAATGCTGGAGGAGCTGAAGACT
CCGAGGAGGAAACGGCTGCTGGACATTCCGAATCTGGTGAAGAAAGTGAG
GAGATTGAGAGCAATTTGACAGACTTTAAAAAAAAGTTTGAGGCTGGAGA
TTTTAAGTATGATGATGATGAGGAGGAGGATGATGACTCTGAGGAAGAAG
ACCATAGCCAGGAAAGTGAAGGAGATGACGACGATTCAGAAGATGATGAA
GCAGAAGACGACGCAATCAAACCCTCGGATGTAATGTCCAAAACCAACCA
TCAAGCTGAAATCCAAAAAGGACTTGCCGTCCAAAACCAGCTGCGCATCT
GGGAGCGTCTTCTCGAGCTAAGGATCAACACCCAAAAGTTCACCAGCAAA
GCGAATCAGCTTCCTGCACCGGAAACTCTAACGAAACTGGCATCGGAAAG
CGATGAGCTTCAGTCGGTGCTTAACGAGGCCCAGGAGCGTTCATCCAAGC
TACTGCAGCAACTGCTCTCCCTCCAGTCAGCTCTCCACCAGCAATACTCC
GAGATGAAAAAGTCCGGTGAAGCGCAAGCAGCCCACAGAGGATTCGGGTC
CCGGCGGTCAAAAGGTTTGGTTCTGTGCTGCAGAGCAATTTTCAAACAAA
TGATTGGGTATCGCATGAAGTTCTGTAAGTGGGACGACCGTACGAAACTC
CCTGACCCCCGGGACGGGTGTCAACGCAGTTCCTGGCAGGAGGACCTACG
ACTCATCAAAGATCGGAGGCGCCTTGACGACGAGAGGGCCTGTGGAAATT
CCAACCCATGACGCATCGTACTGCAGGAACCCGCCCGTGCGCGATGAGAC
CACTCTACAGACGTAAGTGCGAA
FMO03682.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aatf-RA | 1703 | CG11188-RA | 87..1209 | 31..1148 | 5100 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6717711..6718775 | 31..1095 | 4875 | 98.6 | Plus |
Blast to na_te.dros performed 2014-11-28 20:09:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Circe | 7450 | Circe CIRC 7450bp | 2159..2207 | 515..563 | 110 | 69.4 | Plus |
FMO03682.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:07 Download gff for
FMO03682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11188-RA | 83..1174 | 23..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:35 Download gff for
FMO03682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11188-RA | 81..1172 | 23..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:02 Download gff for
FMO03682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aatf-RA | 83..1174 | 23..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:02 Download gff for
FMO03682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6717707..6718731 | 23..1051 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:07 Download gff for
FMO03682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6717707..6718731 | 23..1051 | 98 | == | Plus |
