FMO03683.5prime Sequence
850 bp (850 high quality bases) assembled on 2008-08-11
> FMO03683.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGCCAAATAAATCCG
AGGAGCTGGGCGAAACGCAACTGACCAAAAGACAGAGGAGGAAGCAGACG
ATCTGGACGCGGGAGAAGATCGCCAAGCTAATCGAACTTTACCGCTCGTC
GGACTGCTTGTGGAACCACTATTCCGAGCTATATAAAAACAAGGATTGCA
GGGCTAAAGCCATCGAATCCATCTGCGCTTCGCTTGAAATAACGAAACAC
GACTATGGCAAGAAGGTGCACAACCTGCGCAATCAATTCAATGCAGAGCT
CAAGAAGTTGGAGAGGAGGCTCGAGGAGTCTGGAGGAGATCGAGATTCGG
AGAAGGCTTGTCGATGGGAGCACTTCAAGACGTTGATGTTCCTACGATCT
GTTATAGAACCACGACCAGGCTATCAACAAGGTGCTCCGGGCAAGAAATT
GGTATCGAAGCTGGACATGTGCTACCCGGATCAGGATGTGGAAAAGCAGA
GCCAATCCTCGATAGAAAGTCTGGAATCCATGATCATAGAGAACGATGCA
GAAATCTGTCAGCCTCCGAAGGTCAGCGAACCCATTCCTCCGATGCCTCC
TGAACCTGCGCCGTCTTCCAAATTCGTTGATCCAAATCGAACTGTCGAAG
CTCCAGCTGCTCCCTCTCCCTTCCACTTACCATTAAGTGGTCGTGATCAA
TGTGACGCATTTGGCGAACTAATCGCCAGTGAATTCCGTAACCTGAACTC
TGAAGTTTCGCGCAAGAGGCTGAAGCGGAAAATAATGCAAGTTATGCTGG
AAGTCGGCGAAGAAGATGATCTTACAAACAGTGCAAGCTTTCTAGACCAT
FMO03683.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10904-RB | 1070 | CG10904-RB | 68..865 | 35..832 | 3975 | 99.9 | Plus |
| CG10904-RA | 950 | CG10904-RA | 68..865 | 35..832 | 3975 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23969596..23970006 | 445..35 | 2055 | 100 | Minus |
| 2R | 25286936 | 2R | 23969146..23969534 | 832..444 | 1930 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:18:00 has no hits.
FMO03683.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:34 Download gff for
FMO03683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10904-RA | 65..865 | 32..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:08 Download gff for
FMO03683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10904-RA | 61..861 | 32..832 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:55 Download gff for
FMO03683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10904-RA | 65..865 | 32..832 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:55 Download gff for
FMO03683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23969146..23969532 | 446..832 | 99 | <- | Minus |
| 2R | 23969596..23970009 | 32..445 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:34 Download gff for
FMO03683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19856669..19857055 | 446..832 | 99 | <- | Minus |
| arm_2R | 19857119..19857532 | 32..445 | 99 | | Minus |
