FMO03692.5prime Sequence
406 bp (406 high quality bases) assembled on 2008-08-11
> FMO03692.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGTTTAAGCTATCGCTCT
GCCTGCTCGCCGCTCTGATGCTGGCCAATGTGTATGCGGACAACATAAAC
AAGGATGCCGTGATCACCCGCGAGGATGTTAATCCTGCCGACGCCGAGGG
CAACTACCAATACGCCTTCGAGACCAGCAATGGTATTCAGGCCCAGGAGG
CCGGAAACGTCAATGGCATTAGCGGAAGCAGCTCTTACATCTCCCCCGAA
GGCGTCCCCATCTCACTGACCTACGTCGCCGATGAAAACGGCTTCCAGCC
TCAGGGCGATCACCTTCCCACCGCTCCCCCAATCCCGGAGGCCATCCTCC
GCGCCCTGGAATACATCGCCGCCCACCCTCCACAGCCCGCAAGCTTTCTA
GACCAT
FMO03692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr78Cc-RA | 522 | CG7658-RA | 42..398 | 32..388 | 1785 | 100 | Plus |
| Edg78E-RB | 546 | CG7673-RB | 174..403 | 138..367 | 250 | 75 | Plus |
| Edg78E-RA | 967 | CG7673-RA | 174..403 | 138..367 | 250 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21300703..21301047 | 44..388 | 1725 | 100 | Plus |
| 3L | 28110227 | 3L | 21297327..21297556 | 367..138 | 250 | 73.9 | Minus |
| 3L | 28110227 | 3L | 6161392..6161450 | 263..321 | 190 | 88.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:58:32 has no hits.
FMO03692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:18 Download gff for
FMO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Cc-RA | 35..401 | 24..392 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:32 Download gff for
FMO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Cc-RA | 27..393 | 24..392 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:00 Download gff for
FMO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr78Cc-RA | 35..401 | 24..392 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:00 Download gff for
FMO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21300703..21301050 | 44..392 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:18 Download gff for
FMO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21293803..21294150 | 44..392 | 99 | | Plus |
