FMO03702.5prime Sequence
1229 bp (1062 high quality bases) assembled on 2008-07-21
> FMO03702.5prime
CTTCGTATAGCATACATTATACCAAGTTATCAGTCGACATGTCGAAGAAC
TGCATGATAACGTTCGACCAGAATGAGCACGGCACCTACTTCACCGGCCA
GGTGATAACCGGCAAGGTGATTGTCAATCTGAACAAGACCAAGAAACTGC
GAGGAATAAAACTGCAAATAAGTGGCTATGCGCAAGCCCAGTGGCGCATC
CGCAGACATGGTAAGGCGGTGGCAATCCAAAACCCCAAGAAGCGATCAAA
GCACCAGTACAGCGGGCGGGAGGACTATATAGCCTCCACCACTTACCTCA
TGGGTTCCGAGCAGGGCAGCAACTTTAACATGGACGCCGGCACGTACACC
TACACTTTTGCTTGCCCCATTCCCAGCCACTGCCCCTCGTCCTTCGAGGG
TGCCTATGGACACATCCGGTATCTGGCCAAGGTCACCTTTTTGAAGCCAG
GAGCTTCCAATCGCACCCACAACGTGGGCTTCACTGTGCTAAAGCTGCTG
GACTTGAACCAGGAGACCAAGATGCTCCGGGAACCGGCGAGCAATGAAGC
CGTGGAACACTTTTGCCTGATGCACACGAAGCCCGTGCAGTTGAAGGTCA
CTCTCCAGCAGCAGGGCTATGTTCCGGGTCAGTTCATGTTGATCCACGCC
CATGTGCGTAATGACTCCAGCTCCGATTGTCGGAAGCTACTGATCATGCT
GCATTTGAGAGCCACATACACGGCGGATACGCCCTCGCTACGCACCACAT
CCGAGAAGATAATGCTGGTGAAGCGCGAGTGCGGTCCGGTGGCTCATAAT
GCGCAGAGGACTTACACGGAAACCCTGAGGATTCCGGCAACGGCGCCCAC
CTGCGAGCACCTAAGCAAGGTGGTGCGCGTATCTTACGAAGTGCGTGTGG
TGGCTGTTATGACTGGCTTATGGCTAATCCCCGGCTCATAATTCCCTGTG
ACTATTGGCAACGTGCCCCTGGCACTGCGGTGTCCGGACCGGACTTCCTG
CCAACTAACGCCCTCCCATCTGGAAGTCGCTGCCTGCCGACTTGCCATGC
ACCCTCTACAAGGTCATGTACTGGCTCAGATGGCGCAAGCGGGGGTTCAG
CACTCCGCTACGAGATGGCGAGATCTAGAGGACTCCGAGCCTTCGAGGAT
GGAATGAATATGAGGCTGCGGCATTCGTACAGATTACCCTCCTCCTAACA
CTTCGAGACAGGCCATGTTCTCACTGTGA
FMO03702.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10086-RA | 1864 | CG10086-RA | 93..1288 | 37..1220 | 5195 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7791669..7792572 | 152..1053 | 4310 | 99.4 | Plus |
| 3R | 32079331 | 3R | 7790725..7790842 | 37..154 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:22 has no hits.
FMO03702.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:52 Download gff for
FMO03702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10086-RA | 87..1196 | 30..1134 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:00 Download gff for
FMO03702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10086-RA | 79..1188 | 30..1134 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:45 Download gff for
FMO03702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10086-RA | 87..1196 | 30..1134 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:45 Download gff for
FMO03702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7790719..7790841 | 30..153 | 97 | -> | Plus |
| 3R | 7791671..7792657 | 154..1134 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:52 Download gff for
FMO03702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3616441..3616563 | 30..153 | 97 | -> | Plus |
| arm_3R | 3617393..3618379 | 154..1134 | 98 | == | Plus |
