FMO03703.5prime Sequence
679 bp (679 high quality bases) assembled on 2008-07-21
> FMO03703.5prime
TTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGAGCGCCACGG
ATGACTTCCAGAGCTGGCTCAACGAGCAGCTGCGCAAATTGAACACCGAC
GAGAACGTTTTCGGTTCGTATATTATTGGAATTTTGGAGGGCGACGAAAC
GACAGATGAAAAAACCGAGGCTCTCGAGGGAATTCTCAGCGAAACAGGTT
CCGCCAACATTGACGAACTGGTGGCCACCATACTACAAAAGTGGCTACAG
AGCCATCCCAGCGCCGATGATCCGCCGAAAAAAGGTCTGGATATCGATGT
GAATGCCCAGTTGGCCAAGTTGCTGGAGCAACAGAAGCTGCAACCCGCCG
TAAACAAGGAGCGTGAATACACCGAAGAGGAGCGTCGCATCAAGCAGCAG
ATTCTAGCTCAATACTCCCAGACTGCCGTTGCCAACGAGGACGACGAGAA
TTCCGAGGCGGAAAGCGAGGATGACAGTGGAACGCTCACCAAGAATACCA
ACAAATCGGATGTCCAGGCGCTAGCCAAGGAAAAGCGGGAGCAGGCCCGA
ATGGATAGTGCGGCCAAAAAGCAAAAGGACAAAGAGGATCGGGAAAAGCA
AAAGCAACTGCGCGAGGAAAAGAAGGAGAAACGCAAAACCGTCAAAGGCG
AACGGCGTCGAGCAAGCTTTCTAGACCAT
FMO03703.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9586-RB | 936 | CG9586-RB | 130..754 | 37..661 | 3125 | 100 | Plus |
CG9586-RC | 966 | CG9586-RC | 130..514 | 37..421 | 1925 | 100 | Plus |
CG9586-RC | 966 | CG9586-RC | 542..784 | 419..661 | 1215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9165603..9165845 | 661..419 | 1215 | 100 | Minus |
2L | 23513712 | 2L | 9165943..9166164 | 421..200 | 1110 | 100 | Minus |
2L | 23513712 | 2L | 9166223..9166385 | 199..37 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:09:24 has no hits.
FMO03703.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:31 Download gff for
FMO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9586-RB | 124..757 | 31..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:00 Download gff for
FMO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9586-RB | 55..688 | 31..665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:33 Download gff for
FMO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9586-RB | 124..757 | 31..665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:33 Download gff for
FMO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9165600..9165842 | 422..665 | 99 | <- | Minus |
2L | 9165943..9166164 | 200..421 | 100 | <- | Minus |
2L | 9166223..9166391 | 31..199 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:31 Download gff for
FMO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9165600..9165842 | 422..665 | 99 | <- | Minus |
arm_2L | 9165943..9166164 | 200..421 | 100 | <- | Minus |
arm_2L | 9166223..9166391 | 31..199 | 98 | | Minus |