FMO03704.5prime Sequence
683 bp (683 high quality bases) assembled on 2008-07-21
> FMO03704.5prime
CGTATAGCATACATTATACAAAGTTATCAGTCGACATGGATGACGAAGCG
GAAACCTACAAGCTGTGGCGCATTCGCAAGACCATCATGCAGCTGAGCCA
CGATCGGGGCTACCTGGTGACCCAAGACGAGTTGGACCAGACCTTGGAGC
AGTTCAAGGAAATGTTCGGCGACAAACCCAGCGAAAAGCGACCTGCTCGT
TCCGATTTGATAGTTTTGGTGGCCCACAACGACGATCCCACGGACCAGAT
GTTCGTCTTCTTTCCCGAGGAGCCGAAGATCGGCATCAAGACAATCAAGA
CGTACTGCACTCGCATGCAGGAAGAGAACATCCACCGGGCCATCGTTGTG
GTGCAGGGCGGCATGACGCCCTCCGCCAAGCAATCGCTCGTAGATATGGC
CCCCAAGTACATCCTGGAACAGTTTCTCGAATCCGAACTGCTGATCAACA
TCACGGAGCACGAACTGGTCCCGGAGCACGTGGTCATGACCGTCGAGGAG
AAGCAGGAGCTGCTCAGCCGTTACAAACTGAAGGAGAACATGTTGATGAG
GATCCAGGCGGGCGATCCCGTGGCCCGGTACTTTGGACTCAAGCGCGGCC
AGGTGGTTAAGATCATCCGTTCCTCTGAGACGGCGGGACGGTACATATCC
TATCGATTGGTGTGCGCAAGCTTTCTAGACCAT
FMO03704.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpb5-RB | 1030 | CG11979-RB | 96..726 | 35..665 | 3155 | 100 | Plus |
| Rpb5-RA | 816 | CG11979-RA | 96..726 | 35..665 | 3155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10898335..10898965 | 665..35 | 3155 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:47:28 has no hits.
FMO03704.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:49 Download gff for
FMO03704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb5-RA | 91..733 | 26..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:26 Download gff for
FMO03704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb5-RA | 89..731 | 26..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:13 Download gff for
FMO03704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpb5-RA | 91..733 | 26..672 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:13 Download gff for
FMO03704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10898328..10898970 | 26..672 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:49 Download gff for
FMO03704.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6785833..6786475 | 26..672 | 98 | | Minus |
