Clone FMO03708 Report

Search the DGRC for FMO03708

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14153-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03708.5prime Sequence

742 bp (742 high quality bases) assembled on 2008-07-21

> FMO03708.5prime
TTATCAGTCGACATGAAGCCGCAAACAGGACGGATCGTGAAGAGCAGCTC
GTCGAGCTGGCTATGTGCACTTATGCCCCTGATGATCGATGCGGTTTGTG
GGAGAGCTCAGTATGCATCACCTTATGGCAGTGCTTATGCAATTACCACA
TCCAACTACGCTCAATCCAACTATGCCAATCCAGATGTACAATCGATATG
GTCGGGTCCGCCTATCATAGTGAATGATAATCAGTACAGTGCCCAGGAAC
AGCAGCAGTATCCAAAAAGTAATGGTTATTATGTTGCGGAACCTGCGTAT
AGACAAGCATATCCAAATTGGAGAAGGGAAGACCCAACACATGCTCCCAA
TCACAACTATAACAATGTGCCCGGCTACTTTTACTATCAACAACAGGAGA
CTACGCCATCAACACCTCTGCGCTATCCTCAATCTCAAATTCCACCTCAA
CTTCAGCCATATCCACAAAGGAATCCGGAATTGGAGACCAGCGATTCGGG
TCGCGATGAGGAGCAAGTGGTCCAAATTGGCGGCAGTCGCTCATTGGCCA
CAAATAACTATCTAAATACGTACAATAATAAGGAGAATTTCTATGAACCC
GCTCAGCCCTGGAGGCGTCGTGATTACCAAGCCAAATATGCCCAACATTT
TTGCCGAATATTTGCGTAAATATCCAAGACGCCTGCAGCCAGTTTACAAC
ACCAACGAGGATTTTGTTGAAAAGGCAAGCTTTCTAGACCAT

FMO03708.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14153-RA 1022 CG14153-RA 7..726 5..724 3510 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10643656..10644319 60..724 3245 99.5 Plus
3L 28110227 3L 10643543..10643590 13..60 240 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:05:27 has no hits.

FMO03708.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:00 Download gff for FMO03708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 3..726 1..724 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:20 Download gff for FMO03708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 2..721 5..724 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:52 Download gff for FMO03708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14153-RA 3..726 1..724 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:52 Download gff for FMO03708.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 10643530..10643590 1..60 93 -> Plus
3L 10643657..10644319 61..724 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:00 Download gff for FMO03708.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10636630..10636690 1..60 93 -> Plus
arm_3L 10636757..10637419 61..724 99   Plus