FMO03709.5prime Sequence
1220 bp (1085 high quality bases) assembled on 2008-07-21
> FMO03709.5prime
CTTCGTATAGCATACATTATACAAAGTTATCAGTCGACATGAAGGCAAAA
AAGAAGTTGGGCGTGGGATTGAGCCGCCAGGAACGACAGGTGCTCGTCAT
CGGGGAGATCATTCAGGAGCTGCTGAAGGCGCACGAAGCCAAAAAGGATG
TAAACCTTAATCGGATGAAATCATTGGTGGCCTCCAAATATGGACTGGAC
AGTTCGCCGCGCCTGGTCGACATAATTGCTGCCGTGCCGCAGGACGCCAA
AAAAATTCTGCTTCCAAAGCTGAGGGCAAAGCCCATTCGCACAGCAAGTG
GCATCGCCGTGGTCGCCGTCATGTGCAAGCCGCATCGTTGTCCGCACATC
AATATGACCGGCAATATATGCGTCTATTGTCCCGGCGGACCGGACAGCGA
CTTTGAGTACTCGACACAGTCGTACACAGGCTACGAGCCGACCTCGATGC
GAGCCATCCGGTCGCGGTACGATCCTTTTCTTCAGACCCGACACCGCGTT
GAACAGCTGAAGCAGCTGGGACACAGTGTGGACAAGGTGGAGTTCATCGT
AATGGGCGGTACGTTCATGTGCCTGCCGGAGGAGTACCGCGACTACTTTA
TCCGCAACCTACACGACGCCCTCTCCGGCCACAGCAGCGCCAATGTGGCG
GAAGCCGTACGCTACTCGGAGAAGTCACGCACAAAGTGCATTGGCATCAC
CATAGAAACAAGGCCAGATTACTGCCTAAAGCGGCACATATCGGATATGC
TTAGCTATGGTTGCACCCGGCTGGAAATCGGTGTGCAATCGGTTTACGAA
GACGTGGCCAGGGATACGAACCGCGGACACACGGGTGCGAGCGGTGTGCG
AGAGCTTCCAGCTGGGCAAGGATGCTGGCTATAAGATCGTGACGCACATG
ATGCCTGATCTTCCCAATGTTGACTTTGAACGCGACATCGAGCAGTTTAT
CGAGTACTTTGAGAACCCTGCCTTCCGCTCTGACGGCCTAAAGATCTATC
CCACGCTCGTCATTCGCGGCACTGGGTCTCTACGAGTATGGAAACCGGGC
TGAATTAGTCATATTCCGCCATCAATGCTTGTGGACTTGGTGCGAAGAAT
TTGTCCTGTCAACATGGACCGCGAGGACCGCGTACAGCCGACATCCATGC
GCTGTAAGTTCGCTGACGATCTCAGTACTGAGCTGCCGCATGAAAGAATC
TTGTGAAACCACTGTGCATG
FMO03709.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elp3-RA | 1863 | CG15433-RA | 80..1191 | 39..1144 | 5115 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4445193..4445981 | 303..1092 | 3620 | 98.6 | Plus |
| 2L | 23513712 | 2L | 4444894..4445136 | 60..302 | 1215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:55:32 has no hits.
FMO03709.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:18 Download gff for
FMO03709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elp3-RA | 71..1203 | 29..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:31 Download gff for
FMO03709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elp3-RA | 71..1203 | 29..1153 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:21 Download gff for
FMO03709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elp3-RA | 71..1203 | 29..1153 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:21 Download gff for
FMO03709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4444895..4445136 | 61..302 | 100 | -> | Plus |
| 2L | 4445193..4445990 | 303..1099 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:18 Download gff for
FMO03709.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4444895..4445136 | 61..302 | 100 | -> | Plus |
| arm_2L | 4445193..4445990 | 303..1099 | 98 | -> | Plus |
