FMO03711.5prime Sequence
950 bp (950 high quality bases) assembled on 2008-07-21
> FMO03711.5prime
ACTTCGTATAGCATACAAAATACGAAGTTATCAGTCGACATGATGATGCA
ACGCACCCCGCTCCTGCTGCCCCTGGCCATGGAGGCCACCATGCTGGCCC
AGCAGCAGCGTGGCATGGCCACCCTGAAGATGATTTCCATCCGCCTGAAG
TCGGTGAAGAACATTCAGAAAATTACGCAATCGATGAAGATGGTGTCCGC
TGCCAAGTACGCTCGTGCCGAGCGAGACTTGAAGGCGGCTCGTCCTTACG
GCATCGGCGCCCAGCAGTTCTTCGAGAAGACGGAGATCCAGCCGGACGAG
AAGGCGGAGCCCAAGAAGCTGCTCATCGCAGTGACTTCGGACCGTGGTCT
TTGCGGTGCCGTCCACACTGGTGTGGCCCGTCTCATTCGCGGCGAACTGG
CCCAGGACGAGGCCAACACTAAGGTGTTCTGCGTGGGCGACAAGTCGCGC
GCGATTCTGTCCCGTCTGTACGGCAAGAACATCCTGATGGTGGCCAACGA
GGTGGGCCGACTGCCCCCCACTTTCCTGGACGCCTCGAAGATTGCCAACG
AGGTTCTGCAGACCGGTTACGATTACACCGAGGGCAAGATCGTGTACAAC
CGTTTCAAGTCGGTGGTGTCCTACCAGTGCTCCACCCTCCCCATCTTCAG
CGGATCCACCGTGGAGAAGTCGGAGAAGCTTGCCGTCTACGACTCGCTCG
ACAGCGACGTGGTCAAGAGCTATCTGGAGTTCTCGCTGGCCTCGCTCATC
TTCTACACCATGAAGGAGGGCGCCTGCTCGGAGCAGTCCTCCCGTATGAC
TGCCATGGACAACGCTTCCAAGAAACGCCGGTGAGATGATCGACAAGCTG
ACCCTCACCTTCAACCGTACCCGACAGGCGGTCATCACTCGCGAGCTGAT
TGAAATCATCTCGGGTGCCGCCGCCCTCACAGCAAGCTTTCTAGAACCAT
FMO03711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-gamma-RC | 1166 | CG7610-RC | 123..1013 | 40..931 | 4390 | 99.6 | Plus |
| ATPsyn-gamma-RB | 1395 | CG7610-RB | 363..1253 | 40..931 | 4390 | 99.6 | Plus |
| ATPsyn-gamma-RA | 1080 | CG7610-RA | 48..938 | 40..931 | 4390 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29747857..29748747 | 931..40 | 4365 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:29:37 has no hits.
FMO03711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:30 Download gff for
FMO03711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-gamma-RA | 45..943 | 33..937 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:31:16 Download gff for
FMO03711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-gamma-RC | 92..991 | 32..937 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:23 Download gff for
FMO03711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-gamma-RA | 45..943 | 33..937 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:23 Download gff for
FMO03711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29747852..29748745 | 42..937 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:30 Download gff for
FMO03711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25573574..25574467 | 42..937 | 99 | -> | Minus |
