FMO03716.5prime Sequence
847 bp (847 high quality bases) assembled on 2008-07-21
> FMO03716.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAACGTGG
AATCGCTGTACAAAGAACTGACCGCCGAGTGGTCAAAGCGGCCACCAAAC
ACCGTCAAATGCGGCCAGCTGCTGGATCAACTGAAAGTAGCGCTCGTGAA
GATGGCCTTCCTGCCGACGGACGGAAACGATGCCCAGAGCTCCAAGAAGC
AATTGATCCTGGCTAGGAGCGTGCTTGAGGTGGCCGTGGAGCATAGCGTG
CTCAGCAAGGACCTGCTCGCCTTCGAGCGCTACATGGCGCAGCTGAAGTG
CTATTACTATGACTACGCTAAGATCATTGGCGAATCGGAGAGCAAGTATA
AGCTGCTCGGTCTGAATCTGCTGTACCTCTTGTCTGGCAACCGGGTATCC
GACTTTCACACGGAACTGGAGCTGCTCTCCGTGGACGTCATCCAGCACAA
TCAGTTCATTCGGCCCATCCTGGCGCTCGAGCAGTACATCATGGAGGGAC
GCTACAACAAGATCTTTCAGGCCAAGTCGACGGTGCCCGTCGAGGTGTAT
AGCTACTTTATGGATCTTCTGTTGGAAACGGTGCGCGATGAAATTGGTGC
CTGCATCGAGAAGTCCTACGACAAGATCTCCGCCAAGGATGCAGCCAAGC
GGCTCAACCTGCGCGTCCCCGACGAGATCAAGGCCTTCGGCGCGAAGCGT
CAATGGAAACTGGAGGCTAGCGGCGACTACAGCTTCACGGACCGTAGCGT
CAAACCCAAGGAGCTCCTGCCCTCCGAGGAACTCGCCGAGCAGGTGCTCA
GCTACGCCCGCGACCTCGAGATGATAGTTGCAAGCTTTCTAGACCAT
FMO03716.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpn12-RA | 995 | CG4157-RA | 73..864 | 38..829 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16583100..16583891 | 38..829 | 3960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:34 has no hits.
FMO03716.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:04 Download gff for
FMO03716.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn12-RA | 71..868 | 35..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:22 Download gff for
FMO03716.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn12-RA | 116..913 | 35..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:55 Download gff for
FMO03716.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpn12-RA | 71..868 | 35..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:55 Download gff for
FMO03716.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16583098..16583895 | 35..834 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:04 Download gff for
FMO03716.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16576198..16576995 | 35..834 | 99 | | Plus |
