FMO03717.5prime Sequence
1081 bp (780 high quality bases) assembled on 2008-07-21
> FMO03717.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAATCGACATGTTTTGCCGA
ATATCCGGCAATAAAAGCCGGGGCAAGGTCATAGCCAAAACAGTTCACAG
CGATATGCTTTGGCGCTGCGAGTATCTTATTTTGGGAATGCTGCTCTTGG
CCGAGCTTACCCAGTTGGGTGAAGCGGTGACAGCCAATCACCAAAGGAGA
AACAGGAGACTGAGAAGCGACAACGGAACCAAGAGGTTGACGGGCACAAA
AAACCAAACCGGAATCAAAAGCAATCGACGCCAAGGTACAGCGAGGAAAC
TCTCCGCCAAGAGGGTCAACCAGAACAAAAAGGCCGCCACATCGTCCAAG
ATTCATTCCAGGATTGTGGGTGGCACCAGTACCACTATTTCCACCACACC
GTACATTGTTCAGTTGCGTCTAGGATCGAATCTGTGTAGCGGTTCCCTCA
TAACCGAACAATGGGTTCTAACTGCTGCCCATTGCGTCAAGGGATACAGT
GCCTCCGATTTCACGGTGCGCGGAGGAACCACTACTTTGGATGGGAGTGA
TGGCGTCACTCGCTCCGTCAGTTCCATTCATGTGGCTCCGAAGTTCACCT
CAAAGAAAATGAACATGGATGCAGCTTTGCTGAAGCTGAACCAATCCCTG
ACGGGCACCAATATCGGAACCATATCAATGGGCAACTATCGACCCAAGGC
CGGTTCAAGGGTACGCATTGCAGGATGGGGTGTGACCAATGAATGTTCTA
CAACGGCATCCAAAACTCTGCAGACCGCCCATATAATGGTGGTCTGGCAG
CAAAAGTGTCGGAAGGACTACCGCGGTCAGGCTACCATCACCAAGTACAT
GCTTTGTGCCCGCGCTGCTGGCAAGGATTCATGCAGCGGAGACTCCGGTG
GCCCAGTGACCAGTAACAACACACTCTTGGGCATCGTATCCTGTGGTCTA
CGGGTGCGCCAGAGTCAGCTACACAGTTGTATACACAGCCGTGGATGCGA
TCCGCTAGTGGACACCAACATCATGGCCACAATGCAGCCTTCTAGACCAT
TCGTTGGCGCCGCGGGTCCATGTAAGTGGAT
FMO03717.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32270-RA | 2037 | CG32270-RA | 965..1955 | 39..1029 | 4610 | 97.8 | Plus |
| CG32269-RB | 1195 | CG32269-RB | 123..1113 | 39..1029 | 4610 | 97.8 | Plus |
| CG32269-RA | 2037 | CG32269-RA | 965..1955 | 39..1029 | 4610 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3207031..3208021 | 1029..39 | 4560 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:33:16 has no hits.
FMO03717.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:37 Download gff for
FMO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32270-RA | 958..1968 | 28..1041 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:14 Download gff for
FMO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32269-RA | 955..1965 | 28..1041 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:00 Download gff for
FMO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32269-RA | 958..1968 | 28..1041 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:00 Download gff for
FMO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3207014..3208032 | 26..1047 | 96 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:37 Download gff for
FMO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3207014..3208032 | 26..1047 | 96 | -> | Minus |
