FMO03719.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-07-21
> FMO03719.5prime
TTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGTTCTGCTGCC
TACGCACCTGTCTCAATGGTGGACACATAAGGAAACCGACGGCAACCAGT
CGCCTGCGGGAGCCCGATGTTCACCTGGATGCAGCGCATATGGGACCTGA
TGTAATCCTGCTGTCACACCAACTGCGCGTAACGGGCACTGGCGGCGTCC
TGGCCACGGCGCCTTTGGTCCAATCGAAGTCCTACTTCGAGGTGAAGATC
CAGCACGGCGGCAGCTGGTCGGTGGGCTTGGCAACGCGTCAAACGGATCT
CAGTCGCAAGAGCGGCGGCGGGGATCGAGAGTCCTGGTGCCTGTGCTCCG
ATAATGCCACACGCCACAATGACCGCGAGGAGTTCCGACCAGTGGTGCAG
TCTGCTTGCACCACTCAGCCAGCGAGGACGAGCAATGGTATCCTGAACAA
TAGCGCTGCCAAAGCGGCCGGACTCATTGCCATCGAGGATTTGCAGCAGG
AAGATCTGCTGATGACCACTGGAGTGGCATCATCCGATGTGGATATCGGT
GATTCGTTGATAGCATCGCCACAGCGAGATTTTCCCGATGAAGGAGACAT
TGTGGGCGTCGCCTTTGACCACGTGGAGCTGAATTTCTACTTCAATGGAA
AGAATCTGGAGGTTCCATTTCGAAATGTACGAGGAGCAGCACTATTTCCC
GTCATTTATGTGGGCAATGGCGCCATTCTGGACATTATCTTGGATAATTT
TTCACACGGACCACCACCAGGATTCGAACGCATTCTATTGGAACAGTCAC
TTTCTTGCAAGCTTTCTAGACCAT
FMO03719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7785-RA | 1747 | CG7785-RA | 115..879 | 38..802 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18022105..18022672 | 143..710 | 2840 | 100 | Plus |
| 3R | 32079331 | 3R | 18021714..18021820 | 38..144 | 535 | 100 | Plus |
| 3R | 32079331 | 3R | 18022729..18022821 | 710..802 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:00:10 has no hits.
FMO03719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:20 Download gff for
FMO03719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7785-RA | 113..882 | 35..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:18 Download gff for
FMO03719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7785-RA | 108..877 | 35..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:23 Download gff for
FMO03719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7785-RA | 113..882 | 35..806 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:23 Download gff for
FMO03719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18021706..18021819 | 28..143 | 95 | -> | Plus |
| 3R | 18022106..18022672 | 144..710 | 100 | -> | Plus |
| 3R | 18022730..18022824 | 711..806 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:20 Download gff for
FMO03719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13847428..13847541 | 28..143 | 95 | -> | Plus |
| arm_3R | 13847828..13848394 | 144..710 | 100 | -> | Plus |
| arm_3R | 13848452..13848546 | 711..806 | 98 | | Plus |
