FMO03720.5prime Sequence
837 bp (837 high quality bases) assembled on 2008-07-21
> FMO03720.5prime
CGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGCTGATCCACGC
ATTACTCTCGGCCTCGGCCTGCTAATCTTTGGCCTGATCCTCTCCGCGGA
AGCCTCGCCACAAGGTCGCATTCTTGGCGGCGAGGACGTTGCCCAGGGCG
AGTACCCCTGGTCCGCATCCGTGAGATACAACAAGGCCCACGTCTGCTCC
GGCGCCATCATCTCAACAAACCACATCCTGACCGCCGCCCACTGTGTGTC
CAGCGTGGGCATCACCCCAGTGGATGCCAGCACCTTGGCTGTTCGCCTGG
GCACCATTAACCAGTACGCCGGCGGCAGCATTGTGAATGTAAAGAGCGTG
ATCATCCATCCATCGTACGGAAACTTCCTGCACGACATCGCCATACTGGA
GCTGGACGAGACCCTGGTCTTTAGCGATCGCATCCAAGACATCGCACTGC
CCCCCACAACTGATGAGGAGACGGAAGATGTGGACGCTGAGCTGCCCAAC
GGAACTCCGGTCTATGTGGCTGGATGGGGTGAACTTTCGGATGGTACTGC
ATCCTATAAACAGCAGAAGGCCAACTACAATACGCTGAGCCGATCCCTGT
GCGAATGGGAAGCCGGATACGGCTACGAATCCGTCGTCTGCCTCTCGAGA
GCCGAAGGCGAGGGCATCTGTCGTGGGGATGCCGGTGCGGCTGTCATCGA
TGACGACAAGGTGCTTCGCGGTTTGACCAGCTTCAACTTCGGACCCTGCG
GCAGCAAGTATCCGGATGTGGCCACCCGTGTCTCCTACTACCTAACCTGG
ATCGAGGCCAATACCCAGGCAAGCTTTCTAGACCAAT
FMO03720.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9673-RB | 978 | CG9673-RB | 18..805 | 31..818 | 3910 | 99.7 | Plus |
| CG9673-RA | 891 | CG9673-RA | 18..805 | 31..818 | 3910 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16702959..16703508 | 818..269 | 2735 | 99.8 | Minus |
| X | 23542271 | X | 16703630..16703867 | 268..31 | 1175 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:06 has no hits.
FMO03720.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:25 Download gff for
FMO03720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9673-RA | 16..814 | 28..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:02 Download gff for
FMO03720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9673-RA | 11..809 | 28..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:15 Download gff for
FMO03720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9673-RA | 16..814 | 28..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:15 Download gff for
FMO03720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16702950..16703508 | 269..827 | 99 | <- | Minus |
| X | 16703630..16703869 | 28..268 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:25 Download gff for
FMO03720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16597663..16597902 | 28..268 | 99 | | Minus |
| arm_X | 16596983..16597541 | 269..827 | 99 | <- | Minus |
