FMO03721.5prime Sequence
827 bp (265 high quality bases) assembled on 2008-07-21
> FMO03721.5prime
TAACTTCGTATAGCATACATTATACGAAGTTATCAATCCACATGTTGAAA
ATCGTGATCCTCTTGTCCGCCGTGGTCTGCGCCCTGGGAGGCACCGTCCC
TGAGGGACTCCTGCCTCAGTTGGATGGCCGCATTGTCGGCGGCTCTGCTA
CCACCATCAGCATCTTCCCCTGGCAGATCTCCCTGCAGCGCAGTGGCAGC
CACTCCTGCGGTGGATCCATCTACTCTGCCAACATCATTGTGACCGCCGC
TCACTGTCTGCAGTCCGTGTCCGCTTCAGTCCTGCAGGTCCGTGCTGGAT
CCACCTACTGGAGCTCTGGTGGCGTCGTCCCCAAGGTTTCCTCTTTCAAG
AACCACGAGGGATACAACGCTAACACCATGGTCAACGACATCGCTGTCAT
CCGTCTGAGCTCTTCCCTGAGCTTCAGCTCAAGCATCAAGGCTATTAGCC
TGGCCACTTACAACCCACCTAACGGAGCCTCTGCCGCCGTTTCCGGTTGG
GGTACCCAGTCGTCCGGATCCATCTCCATCCCCTCCCAGCTGCATTACGT
GAACGTGAACATCGTAAACCAGAGCCAGTGTGCTTCCTCCACCTACGGAT
ACGGTAGCCAGATCCGCAACACCATGATCTGCGCTGCTGCCAGCGGCAAG
GATGCCTGCCAGGGTGACTCCGGTGGCCCACTGGTCTCCGGCGGAGTCCT
CGTCTGTGTTGTCTCCTGGGGATACGGATGCGCTTACTCCAACTACCCCG
GTGTCTATGCCAATGTTGCTGTCCTCCGCTCTTGGGTGGTGAGCACTGCT
AACAGCATCGCATGCTTTCTAGACCAT
FMO03721.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| alphaTry-RA | 860 | CG18444-RA | 27..795 | 41..809 | 3695 | 98.7 | Plus |
| CG30025-RA | 810 | CG30025-RA | 14..761 | 41..788 | 2510 | 89 | Plus |
| gammaTry-RA | 810 | CG30028-RA | 15..761 | 41..787 | 2505 | 89 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11344325..11345093 | 809..41 | 3695 | 98.7 | Minus |
| 2R | 25286936 | 2R | 11353613..11354360 | 788..41 | 2510 | 89 | Minus |
| 2R | 25286936 | 2R | 11349110..11349856 | 787..41 | 2505 | 89 | Minus |
| 2R | 25286936 | 2R | 11350826..11351572 | 41..787 | 2505 | 89 | Plus |
| 2R | 25286936 | 2R | 11355332..11356078 | 41..787 | 2505 | 89 | Plus |
| 2R | 25286936 | 2R | 11346341..11347088 | 41..788 | 2285 | 87 | Plus |
| 2R | 25286936 | 2R | 11345320..11345442 | 769..647 | 270 | 81.3 | Minus |
| 2R | 25286936 | 2R | 11345694..11346047 | 395..42 | 270 | 71.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:06:02 has no hits.
FMO03721.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:02:22 Download gff for
FMO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alphaTry-RA | 23..801 | 38..816 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:28 Download gff for
FMO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alphaTry-RA | 19..797 | 38..816 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:09 Download gff for
FMO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| alphaTry-RA | 23..801 | 38..816 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:09 Download gff for
FMO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11344319..11345097 | 38..816 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:02:22 Download gff for
FMO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7231824..7232602 | 38..816 | 98 | | Minus |
