FMO03722.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-07-21
> FMO03722.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGTCGCGTT
ATTCGTGCACAGCGTAAGGGAGCTGGTTCCGTGTTCAAGGCGCACGTGAA
GAAGCGCAAGGGAGCCGCCAAGCTGCGTTCCCTGGACTTCGCCGAGCGTT
CCGGCTACATCCGCGGAGTTGTCAAGGACATCATCCACGATCCCGGCCGT
GGCGCTCCTCTGGCCGTCGTCCACTTCCGCGACCCCTACCGCTACAAGAT
CCGCAAGGAGCTGTTCATCGCCCCCGAGGGCATGCACACCGGCCAGTTCG
TGTACTGCGGCCGCAAGGCCACCCTTCAGATCGGCAACGTGATGCCCCTC
AGCCAGATGCCCGAGGGTACCATCATCTGCAACCTGGAGGAGAAGACCGG
TGATCGCGGCCGTTTGGCCCGCACCTCTGGCAACTACGCCACCGTGATTG
CCCACAACCAGGACACCAAGAAGACGCGTGTCAAGCTGCCATCCGGCGCC
AAGAAGGTCGTGCCCTCGGCCAACCGCGCCATGGTTGGCATCGTCGCCGG
CGGCGGTCGTATCGACAAGCCCATCCTGAAGGCCGGTCGTGCCTACCACA
AGTACAAGGTGAAGCGCAACAGCTGGCCTAAGGTGCGTGGTGTGGCCATG
AACCCCGTGGAGCATCCTCACGGTGGTGGTAACCATCAGCACATTGGTAA
GGCCTCCACCGTCAAGCGAGGCACATCCGCCGGTCGCAAGGTCGGTCTCA
TCGCTGCCCGTCGTACCGGTAGGATCCGTGGTGGCAAGGGCGACAGCAAG
GACAAGGCAAGCTTTCTAGACCAT
FMO03722.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL8-RB | 1173 | CG1263-RB | 236..1003 | 39..806 | 3840 | 100 | Plus |
| RpL8-RA | 998 | CG1263-RA | 61..828 | 39..806 | 3840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2588082..2588713 | 175..806 | 3160 | 100 | Plus |
| 3L | 28110227 | 3L | 2587753..2587891 | 39..177 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:44:12 has no hits.
FMO03722.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:48 Download gff for
FMO03722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL8-RA | 61..834 | 39..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:37 Download gff for
FMO03722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL8-RB | 205..986 | 27..813 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:24 Download gff for
FMO03722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL8-RA | 61..834 | 39..813 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:24 Download gff for
FMO03722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2587745..2587890 | 27..176 | 96 | -> | Plus |
| 3L | 2588084..2588719 | 177..813 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:48 Download gff for
FMO03722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2587745..2587890 | 27..176 | 96 | -> | Plus |
| arm_3L | 2588084..2588719 | 177..813 | 99 | | Plus |
