FMO03724.5prime Sequence
941 bp (550 high quality bases) assembled on 2008-07-21
> FMO03724.5prime
GTATAGCATACATTAAACGAAGTTATCAGTCGACATGACGTGCGGAAAAT
GTCGCGGTCACAAGGAAAGGAGCGTGAAGTGCCTTTTAGCCGCTTTGGAC
ACAATCAAAGAGCACGCCTTAATGATGCAACGAGACTCAGAGGAAAGTTC
GAGGACCATAGAACAGCTAAAGATCCACAATGAAAAGCTGCACAAGGCCT
TGGACTTGCTGAAGGAGCGGCAGGCATCCTTGGTCCAGGCGGAGAAGCGC
AGGAAGCTGTTGCCCACGAAGATCAAGGATGACATATCGCCGCAGACACA
AAGCCAAAACTCCCTTAACATGAACATAGCCATTAGCAACATAGATCTAT
CCGACGAGGACCAGGAAGTGGAGGAAGACGAGAGCATTACCGAAACGGAG
ACCACTGTCCTCAGCCCGCGCAAACTACGATTGCCAAGTCGAAAGTCGGA
CATCCGGGATCTGGAGAATGTGCAGCCGAGCAATGTTTCTGCGGTGGGAA
ATAGTTGGACCCGCAGACACCCAAGAATCAAGGAGTCCTTACAAAGCTTT
CCCCTCCAACACAAGAGCACAACTTGACCTTGAAGCAACTCGGCCTTAAA
TTCGAAGCAATAGGACGAGCCACAGTGAAAAGAGTTCATAGAGGAGAGTC
CAATTTGGAGCACATTCTGAAAGAATCTAGGCCCGCGAGAATTCTTTATG
CAAGAACGAACAACACGAGCGTTCACGCAGAGCATCTCTTTACCCCCAGG
ATGCCAGTCAGACTAACCAGTTCATTTGAATTGGACAGTTATTGGAGACC
TCGGAATCTAATGGCCACCGAACCCGCCGGTTAGATCACACCCTGAATGT
ATTTTTAGACTGCCACAGATATTCTTGGAGAAACCAATGACCTGGCCCAT
GTCTGCTAATGAGATCCCGCTGGTCTACCAGGAGTTTGCCA
FMO03724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5872-RA | 1859 | CG5872-RA | 133..825 | 35..723 | 2880 | 95.6 | Plus |
| CG5872-RB | 1866 | CG5872-RB | 133..792 | 35..690 | 2825 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20436527..20437070 | 123..663 | 2220 | 96 | Plus |
| 3L | 28110227 | 3L | 20436382..20436469 | 35..122 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:55:38 has no hits.
FMO03724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:22 Download gff for
FMO03724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5872-RA | 133..836 | 35..731 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:18:19 Download gff for
FMO03724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5872-RA | 126..829 | 35..731 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:26 Download gff for
FMO03724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5872-RA | 133..836 | 35..731 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:26 Download gff for
FMO03724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20436382..20436469 | 35..122 | 100 | -> | Plus |
| 3L | 20436527..20437081 | 123..674 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:22 Download gff for
FMO03724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20429482..20429569 | 35..122 | 100 | -> | Plus |
| arm_3L | 20429627..20430181 | 123..674 | 96 | == | Plus |
