FMO03730.5prime Sequence
519 bp (519 high quality bases) assembled on 2008-07-21
> FMO03730.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGGCACTTGG
GGATTCTGATGATGAAACTGAGTTTAAAGAGATCAGCTCGACTAATTATC
ATCGTGTGCAGGAAAAGGTGGCAAAGATAAGCTATGCAGATGGCGTTGCC
GATGGCAGGGAAAAGGTCTTCCAAGAGAGCTTCGATGAAGGCTTTGAGAA
TGGCTTTAAAACTGGATTCGAACTGGCCAAACTGAGTGCCTTCTATGAAA
CCATAAGCAATGCGGCGGGAGCTGAAAGCTCCGAATGGAATGCAGAACGA
GAAGCTTATCAAAAACTCCAACTGGCAGATGCAACAAATAAAGCACACTT
CACATATTTGGAGCATCAAGGCGCTCCACTCAACGTTATATCCGAAAAAC
AAAAGACCTACGTGGACGACCTCCTAGGAAAACTGGCACAGCAACTCCCG
GCAACTACGAATTTATTCACATCGGGGAGCGATTCTAGTGTTAATGTGGT
TGCAAGCTTTCTAGACCAT
FMO03730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31142-RA | 644 | CG31142-RA | 81..545 | 37..501 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23929512..23929889 | 124..501 | 1890 | 100 | Plus |
| 3R | 32079331 | 3R | 23929323..23929417 | 37..131 | 460 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:32:51 has no hits.
FMO03730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:30 Download gff for
FMO03730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 81..548 | 37..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:24 Download gff for
FMO03730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 74..541 | 37..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:08 Download gff for
FMO03730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 81..548 | 37..505 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:08 Download gff for
FMO03730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23929515..23929892 | 127..505 | 99 | | Plus |
| 3R | 23929323..23929412 | 37..126 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:30 Download gff for
FMO03730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19755045..19755134 | 37..126 | 100 | -> | Plus |
| arm_3R | 19755237..19755614 | 127..505 | 99 | | Plus |
