Clone FMO03731 Report

Search the DGRC for FMO03731

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:31
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03731.5prime Sequence

1231 bp (1048 high quality bases) assembled on 2008-07-21

> FMO03731.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGCTGGAG
GCTGTGCCTCCTCCACCGCTACGCCATGAGCAGCATGTCATGGACCCTGC
CACGCCTCTCGCAGTCCAGTGCATCCACCGCCCACGGACTAGTGGGTTCC
GTTCGCCTGACCTACGCCATATGTGCCTTTTTGGCAACTTGCCTACACGC
CGCCATGAGGAACATGCTCGGCATGATCATCCTCAAGATGGTCATGCCCC
GGCCGGAGGATGCACTGGTCGTTCCAGCGGGGTTGAGTCGCCTAACGGAG
GGCAATGTCACCTCCACGGGTCGATGTGGATCTCCTCGGGTCGTTTTCAA
TCCGCAGATTCAAGAGACTCAGTCGGGCGACTTACCATGGACCCGAAACC
AGGAGCTGACCTTCCCAGGTGTCTACTACTATGGCTACGTGGTTTCCATC
TCGCTATCCGGCTATCTGGCAGATCGGTGCAGCAGCAAGCGGCTGTTCAT
CGTGTCCCTGATCTTCGAGGCTGTGGCCTACATACTGCTCCCAGCAATGG
CGCACTCTAGTTTCGAGGCCGGAGTGGTTGATCTGGTCATCTGTGGTTTA
CTGGCGGGCTGTGGAAATCCGGCAATGTATAAACTGTTCGTGACCTGGGC
TCATCCCACAGAGAGAACAGCGCTCCTGTCCTTCGCCTACAGTGGTCTTC
TGATGGGCTCCATGTTGGTTTACCCGGTGGCCAGTTATCTGAGCAACTTC
GGCTGGGAACTGTCCTTCTATGTAGTCGGTGGAGTTGGCCTCTCATTCGG
CATTGCCTGCTGCTTTCTCGTTTACGACACCGTGGAGCAACATCCAAGGA
TATCGAATGAGGAGGTGGATTACCTGAGGCAGGGCAGGAGTCATTGGGAC
AGCAGCGGCAGCCAGTGGTAACCATTCCCTGGAAGAGCCTGCTCGCCGCG
CCGCCCGTCTACGCCTTCATCTGACCCACATGTTCACACCTACACCTTCT
GTGATTGTGCAACTGATGCGCGATTTATGCGCGAGGCATGGAGTCGATCC
TCCGCGAGGTGGCTCTCTCGGCGGCTCGTATCTGGGCGGAATCTGCTCGA
GTGAATGGCATCTGGGTGCAGCTGTGAACCGACCGTGGTCTGAACTGAAT
GGGTGCAATGTGCGTGTACCGGAATCGCACCACTCTGTAACCACTCTTTG
TAAGTGGGTCACTTACATTCACACTCTCTTG

FMO03731.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7091-RB 1880 CG7091-RB 197..1268 40..1100 5005 98.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12978196..12978528 40..372 1665 100 Plus
3R 32079331 3R 12979168..12979480 606..917 1500 99.4 Plus
3R 32079331 3R 12978874..12979111 370..607 1190 100 Plus
3R 32079331 3R 12979536..12979731 915..1100 435 89.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:02:56 has no hits.

FMO03731.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:00 Download gff for FMO03731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 189..1289 31..1118 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:28 Download gff for FMO03731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7091-RA 230..1330 31..1118 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:44 Download gff for FMO03731.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7091-RB 189..1289 31..1118 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:44 Download gff for FMO03731.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12978188..12978528 31..372 98 -> Plus
3R 12978877..12979110 373..606 100 -> Plus
3R 12979169..12979477 607..914 99 -> Plus
3R 12979536..12979752 915..1118 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:00 Download gff for FMO03731.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8803910..8804250 31..372 98 -> Plus
arm_3R 8804599..8804832 373..606 100 -> Plus
arm_3R 8804891..8805199 607..914 99 -> Plus
arm_3R 8805258..8805474 915..1118 91   Plus