FMO03731.5prime Sequence
1231 bp (1048 high quality bases) assembled on 2008-07-21
> FMO03731.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGCTGGAG
GCTGTGCCTCCTCCACCGCTACGCCATGAGCAGCATGTCATGGACCCTGC
CACGCCTCTCGCAGTCCAGTGCATCCACCGCCCACGGACTAGTGGGTTCC
GTTCGCCTGACCTACGCCATATGTGCCTTTTTGGCAACTTGCCTACACGC
CGCCATGAGGAACATGCTCGGCATGATCATCCTCAAGATGGTCATGCCCC
GGCCGGAGGATGCACTGGTCGTTCCAGCGGGGTTGAGTCGCCTAACGGAG
GGCAATGTCACCTCCACGGGTCGATGTGGATCTCCTCGGGTCGTTTTCAA
TCCGCAGATTCAAGAGACTCAGTCGGGCGACTTACCATGGACCCGAAACC
AGGAGCTGACCTTCCCAGGTGTCTACTACTATGGCTACGTGGTTTCCATC
TCGCTATCCGGCTATCTGGCAGATCGGTGCAGCAGCAAGCGGCTGTTCAT
CGTGTCCCTGATCTTCGAGGCTGTGGCCTACATACTGCTCCCAGCAATGG
CGCACTCTAGTTTCGAGGCCGGAGTGGTTGATCTGGTCATCTGTGGTTTA
CTGGCGGGCTGTGGAAATCCGGCAATGTATAAACTGTTCGTGACCTGGGC
TCATCCCACAGAGAGAACAGCGCTCCTGTCCTTCGCCTACAGTGGTCTTC
TGATGGGCTCCATGTTGGTTTACCCGGTGGCCAGTTATCTGAGCAACTTC
GGCTGGGAACTGTCCTTCTATGTAGTCGGTGGAGTTGGCCTCTCATTCGG
CATTGCCTGCTGCTTTCTCGTTTACGACACCGTGGAGCAACATCCAAGGA
TATCGAATGAGGAGGTGGATTACCTGAGGCAGGGCAGGAGTCATTGGGAC
AGCAGCGGCAGCCAGTGGTAACCATTCCCTGGAAGAGCCTGCTCGCCGCG
CCGCCCGTCTACGCCTTCATCTGACCCACATGTTCACACCTACACCTTCT
GTGATTGTGCAACTGATGCGCGATTTATGCGCGAGGCATGGAGTCGATCC
TCCGCGAGGTGGCTCTCTCGGCGGCTCGTATCTGGGCGGAATCTGCTCGA
GTGAATGGCATCTGGGTGCAGCTGTGAACCGACCGTGGTCTGAACTGAAT
GGGTGCAATGTGCGTGTACCGGAATCGCACCACTCTGTAACCACTCTTTG
TAAGTGGGTCACTTACATTCACACTCTCTTG
FMO03731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7091-RB | 1880 | CG7091-RB | 197..1268 | 40..1100 | 5005 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12978196..12978528 | 40..372 | 1665 | 100 | Plus |
3R | 32079331 | 3R | 12979168..12979480 | 606..917 | 1500 | 99.4 | Plus |
3R | 32079331 | 3R | 12978874..12979111 | 370..607 | 1190 | 100 | Plus |
3R | 32079331 | 3R | 12979536..12979731 | 915..1100 | 435 | 89.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:56 has no hits.
FMO03731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:00 Download gff for
FMO03731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7091-RB | 189..1289 | 31..1118 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:28 Download gff for
FMO03731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7091-RA | 230..1330 | 31..1118 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:44 Download gff for
FMO03731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7091-RB | 189..1289 | 31..1118 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:44 Download gff for
FMO03731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12978188..12978528 | 31..372 | 98 | -> | Plus |
3R | 12978877..12979110 | 373..606 | 100 | -> | Plus |
3R | 12979169..12979477 | 607..914 | 99 | -> | Plus |
3R | 12979536..12979752 | 915..1118 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:00 Download gff for
FMO03731.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8803910..8804250 | 31..372 | 98 | -> | Plus |
arm_3R | 8804599..8804832 | 373..606 | 100 | -> | Plus |
arm_3R | 8804891..8805199 | 607..914 | 99 | -> | Plus |
arm_3R | 8805258..8805474 | 915..1118 | 91 | | Plus |