Clone FMO03735 Report

Search the DGRC for FMO03735

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:35
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31386-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03735.5prime Sequence

518 bp (518 high quality bases) assembled on 2008-07-21

> FMO03735.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCTCCAGCTGGG
CTGGCCCCTCGTCCTTCGCTTCATATCCTGTCAGGAGCTGACTTTTTCCT
GTTGCCGCTGCTTCCTTCCTTCCTTTCTTCTGGCTCTTATCTTCGTTTAA
CTTTCTACCATGTTATGGCCCGTTATCTGTCTGCCCGTGTACGTGTCCTT
CGTGTCGGTGTGTGTTCGGTTTCTATGTGTGTGTGTGTGTGTGTGTGTGC
CTCCTCGTCTCTGTTTGCATTTTTGAGCAAATCAAGTGAAATTACATTTT
TCTATGCGATGCTCTTAATGTTATTTGCATACGTATCCTGCAGGCTACAA
TATTTACAAATGAATGCAGTCCGGTGCCGTTCGCTTGGTCCTTGGTCCTC
GGTCCTTGGGGGCTTGGTCCTTTGGAGAATCAGACAAGCGGCTGTTGAAC
CAACCACCTTAACTGCCCAACTTCCCAGCAGACCAACCGCCCAGCCGAAC
GCAAGCTTTCTAGACCAT

FMO03735.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:21:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11270482..11270946 500..36 2325 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:20:59 has no hits.

FMO03735.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:20 Download gff for FMO03735.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31386-RA 1225..1701 27..507 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:53 Download gff for FMO03735.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11270477..11270950 31..507 99 -> Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:53 Download gff for FMO03735.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11270477..11270950 31..507 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:05 Download gff for FMO03735.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7096199..7096672 31..507 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:05 Download gff for FMO03735.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7096199..7096672 31..507 99 -> Minus