FMO03736.5prime Sequence
1155 bp (1016 high quality bases) assembled on 2008-07-21
> FMO03736.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGATGCACACATTC
GAGAACACCTTCATCCGTGGACCATCGCCGTCATATTCCGACGACGCCAA
CTCGGAGAACGCGCTCTCTGTGACGCTGCCCATTGGAGGAGTTGTGCCGG
ACTTGGACTTTTGTCGCGACGACTCGAAAACGGATACGGGCGATTACTTC
GATGAGAAGTACAACAGCGACAGCTGCTCCCGCCTGCATCCGGGTCACCA
GGGACGCAACACGTTCGCCTTCTGGACCATTGTGGTGTTGCTGCTGGTGC
TGACCGTTGGCAATCTTCTGCTGACGCTCACCATTGTGGGTGTGCTTCGC
CTGGGCAAAGGTGTCCAGGGCATGGAGGTGATACCCGAGGTGGATTTGGT
GAAGTTCTACGGTACCACGGACTTGGAGCGCGTGCAGACGAACTCGATTG
GCCAGATACACGGCTTCTCGGATGTCCCGGTGACCATCAGCAGTGATGCT
GGTGACGGCGAGGGCGGCGTCCATGTGCGCGTCTTCCGCAATGGCAATGG
AGCAGCCAGCGAACGCGATAGGATCGTCCTGAACAGGGAGGGTATCCTCG
TGCAGGCCACGAACCTGTTCGAGGTCAAGGACCCCGTCGACAAGCAGCCG
ATTTTCACCACCCATCGTCCGCAGTATAACATTCCGGGCGGAGTGGAGGC
GCTGCAGGCCAAAGTGGTTAGTGCCAGCGGCATCGTCAGTCCCATCGACG
AGTCCCTGGTGCTGGAGAGCGACGGACGCATGGCCATCAGGGGATCCGAG
GGCGTCTACTTCGACGGAGCCAGCGTTGACATGCAGGCCGAGCACCACAT
TCTCATCAACTCCACGCAGGGCGCCATCCATCCTGGAGGCAGGCACGGGT
ATCTTTCTGGACATGGACCGCATTCCCATCGTCAGCTCGAGCTGGGTCTC
GCACGGCCATTGTGCAGTACAGATTGCGTGTGCATGCCGCATGACGCTCT
TCCGGATCGCATACCCAAGGTACACAACGGACCCAAGATCACATGCGCCC
ACTTCAGCGGCAGGACGATCCTGCAGAATCACGCAAGCTTTCTAGACATC
GATGGCGCGCGGCCCAGTTAATGGTCATATCCTATCTAATTCATAATCTT
ATCAC
FMO03736.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Scgbeta-RA | 1194 | CG5657-RA | 87..1129 | 36..1071 | 4945 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12421311..12422343 | 1062..36 | 4750 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:55 has no hits.
FMO03736.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:11 Download gff for
FMO03736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 79..1140 | 27..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:33 Download gff for
FMO03736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 79..1140 | 27..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:40 Download gff for
FMO03736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 79..1140 | 27..1081 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:40 Download gff for
FMO03736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12421311..12422351 | 27..1062 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:11 Download gff for
FMO03736.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8247033..8248073 | 27..1062 | 98 | | Minus |
