Clone FMO03737 Report

Search the DGRC for FMO03737

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:37
Vector:pMK33-CFH-BD
Associated Gene/Transcriptsala-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03737.5prime Sequence

482 bp (482 high quality bases) assembled on 2008-07-21

> FMO03737.5prime
CTTCGTATAGCATACATTAAACGAAGTTATCAATCGACATGAAACTACTG
ATTGCTCTGTTTGCACTGGTGACCGCTGTGAACGCTCAGAATGGATTCGG
CCAAGTTGGACAAGGAGGATATGGAGGGCAAGGAGGATTTGGAGGATTCG
GAGGAATCGGCGGGCAATCAGGTTTTGGTGGACAAATAGGATTCACTGGA
CAGGGTGGAGTTGGTGGCCAGGTGGGAATTGGTCAAGGCGGAGTCCACCC
GGGTCAAGGAGGATTCGCTGGACAAGGTTCTCCAAACCAATATCAGCCTG
GTTACGGAAGTCCTGTGGGATCTGGCCATTTCCATGGAACTAATCCAGTT
GAGTCCGGTCATTTTCACGAAAATCCTCATGAATATCCGGAACATCATGG
CGATCATCACCGTGAACATCATGAGCACCATGGACACCACGAACATCATG
GACATCATACACATGCAAGCTTTCTAGACCAT

FMO03737.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG43355-RC 1697 CG43355-RC 1028..1453 39..464 2100 99.5 Plus
sala-RC 1697 CG4922-RC 1028..1453 39..464 2100 99.5 Plus
sala-RA 698 CG4922-RA 29..454 39..464 2100 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11486284..11486705 43..464 2050 99.1 Plus
Blast to na_te.dros performed 2014-11-28 20:23:41
Subject Length Description Subject Range Query Range Score Percent Strand
springer 7546 springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. 2406..2451 15..56 112 78.3 Plus

FMO03737.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:02 Download gff for FMO03737.5prime
Subject Subject Range Query Range Percent Splice Strand
sala-RA 20..454 30..464 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:15:42 Download gff for FMO03737.5prime
Subject Subject Range Query Range Percent Splice Strand
sala-RA 13..447 30..464 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:27 Download gff for FMO03737.5prime
Subject Subject Range Query Range Percent Splice Strand
sala-RA 20..454 30..464 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:27 Download gff for FMO03737.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 11486282..11486705 39..464 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:02 Download gff for FMO03737.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11486282..11486705 39..464 98   Plus