FMO03737.5prime Sequence
482 bp (482 high quality bases) assembled on 2008-07-21
> FMO03737.5prime
CTTCGTATAGCATACATTAAACGAAGTTATCAATCGACATGAAACTACTG
ATTGCTCTGTTTGCACTGGTGACCGCTGTGAACGCTCAGAATGGATTCGG
CCAAGTTGGACAAGGAGGATATGGAGGGCAAGGAGGATTTGGAGGATTCG
GAGGAATCGGCGGGCAATCAGGTTTTGGTGGACAAATAGGATTCACTGGA
CAGGGTGGAGTTGGTGGCCAGGTGGGAATTGGTCAAGGCGGAGTCCACCC
GGGTCAAGGAGGATTCGCTGGACAAGGTTCTCCAAACCAATATCAGCCTG
GTTACGGAAGTCCTGTGGGATCTGGCCATTTCCATGGAACTAATCCAGTT
GAGTCCGGTCATTTTCACGAAAATCCTCATGAATATCCGGAACATCATGG
CGATCATCACCGTGAACATCATGAGCACCATGGACACCACGAACATCATG
GACATCATACACATGCAAGCTTTCTAGACCAT
FMO03737.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43355-RC | 1697 | CG43355-RC | 1028..1453 | 39..464 | 2100 | 99.5 | Plus |
sala-RC | 1697 | CG4922-RC | 1028..1453 | 39..464 | 2100 | 99.5 | Plus |
sala-RA | 698 | CG4922-RA | 29..454 | 39..464 | 2100 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11486284..11486705 | 43..464 | 2050 | 99.1 | Plus |
Blast to na_te.dros performed 2014-11-28 20:23:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 2406..2451 | 15..56 | 112 | 78.3 | Plus |
FMO03737.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:02 Download gff for
FMO03737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 20..454 | 30..464 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:15:42 Download gff for
FMO03737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 13..447 | 30..464 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:27 Download gff for
FMO03737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 20..454 | 30..464 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:27 Download gff for
FMO03737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11486282..11486705 | 39..464 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:02 Download gff for
FMO03737.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11486282..11486705 | 39..464 | 98 | | Plus |