Clone FMO03739 Report

Search the DGRC for FMO03739

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:39
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13704-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03739.5prime Sequence

464 bp (464 high quality bases) assembled on 2008-07-21

> FMO03739.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTTGGCT
AAGAAGTGCTCCACCTACTTGGTGATATGCCTGGTACTGTTGGCCTGCTG
CCTGCAAGAATCGGAGGCCACGCGACGTGTGAACCGCGGACGACGCACCC
TTACCCGCAGATACTTCACTGGCCTTGCTATTCCCGGATGGGCTCTCATC
GTTTGTGTAGCGGTAGGTGAGCTGCTGATTGGTGGAGCCCTCTACTTCAT
CCTCAAGAAGGTGATCCTGGACAAGGAACCAGATCAGACGGCGGCCTCCT
ACACGCCCGCCCAGACTCATGCGACGGCCACACCTTATACTCCCGCCCAG
ACTCACGATCCGGCCACGGCCACAACCTATACTCCTGCCCAGACTCATGA
GACGGCCAATGTGACTCCCACTCCAACGCATGCCACCGCTATTGTCGCAA
GCTTTCTAGACCAT

FMO03739.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG13704-RA 682 CG13704-RA 98..505 39..446 2040 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4900415..4900692 169..446 1390 100 Plus
3L 28110227 3L 4900276..4900360 84..168 425 100 Plus
3L 28110227 3L 4898997..4899042 39..84 230 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:24:01 has no hits.

FMO03739.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:12 Download gff for FMO03739.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13704-RA 95..505 36..446 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:36 Download gff for FMO03739.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13704-RA 95..505 36..446 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:44 Download gff for FMO03739.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13704-RA 95..505 36..446 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:44 Download gff for FMO03739.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4898994..4899042 36..84 97 -> Plus
3L 4900277..4900360 85..168 100 -> Plus
3L 4900415..4900692 169..446 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:12 Download gff for FMO03739.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4898994..4899042 36..84 97 -> Plus
arm_3L 4900277..4900360 85..168 100 -> Plus
arm_3L 4900415..4900692 169..446 100   Plus