FMO03739.5prime Sequence
464 bp (464 high quality bases) assembled on 2008-07-21
> FMO03739.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTTGGCT
AAGAAGTGCTCCACCTACTTGGTGATATGCCTGGTACTGTTGGCCTGCTG
CCTGCAAGAATCGGAGGCCACGCGACGTGTGAACCGCGGACGACGCACCC
TTACCCGCAGATACTTCACTGGCCTTGCTATTCCCGGATGGGCTCTCATC
GTTTGTGTAGCGGTAGGTGAGCTGCTGATTGGTGGAGCCCTCTACTTCAT
CCTCAAGAAGGTGATCCTGGACAAGGAACCAGATCAGACGGCGGCCTCCT
ACACGCCCGCCCAGACTCATGCGACGGCCACACCTTATACTCCCGCCCAG
ACTCACGATCCGGCCACGGCCACAACCTATACTCCTGCCCAGACTCATGA
GACGGCCAATGTGACTCCCACTCCAACGCATGCCACCGCTATTGTCGCAA
GCTTTCTAGACCAT
FMO03739.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13704-RA | 682 | CG13704-RA | 98..505 | 39..446 | 2040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4900415..4900692 | 169..446 | 1390 | 100 | Plus |
3L | 28110227 | 3L | 4900276..4900360 | 84..168 | 425 | 100 | Plus |
3L | 28110227 | 3L | 4898997..4899042 | 39..84 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:01 has no hits.
FMO03739.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:12 Download gff for
FMO03739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 95..505 | 36..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:36 Download gff for
FMO03739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 95..505 | 36..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:44 Download gff for
FMO03739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 95..505 | 36..446 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:44 Download gff for
FMO03739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4898994..4899042 | 36..84 | 97 | -> | Plus |
3L | 4900277..4900360 | 85..168 | 100 | -> | Plus |
3L | 4900415..4900692 | 169..446 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:12 Download gff for
FMO03739.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4898994..4899042 | 36..84 | 97 | -> | Plus |
arm_3L | 4900277..4900360 | 85..168 | 100 | -> | Plus |
arm_3L | 4900415..4900692 | 169..446 | 100 | | Plus |