FMO03740.5prime Sequence
813 bp (813 high quality bases) assembled on 2008-07-21
> FMO03740.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGCTGAAGTTCGT
GATCTTGTTGTCTGCAGTAGCCTGCGCCCTGGGAGGCACCGTCCCTGAGG
GACTCCTGCCTCAGTTGGATGGCCGCATTGTCGGCGGCTCTGCTACCACC
ATCAGCAGCTTCCCCTGGCAGATCTCCCTGCAGCGCAGTGGAAGCCACTC
CTGCGGTGGATCCATCTACTCCAGCAACGTCATCGTGACCGCCGCTCACT
GTCTGCAGTCCGTGTCCGCTTCCGTCCTGCAGATCCGTGCTGGATCCAGC
TACTGGAGCTCCGGCGGTGTCACCTTCTCTGTGTCCTCCTTCAAGAACCA
CGAGGGCTACAACGCCAACACCATGGTCAACGACATTGCCATCATCAAGA
TCAACGGCGCCCTGACCTTCAGCTCCACCATCAAGGCCATCGGTCTGGCT
AGCTCCAACCCCGCCAACGGCGCTGCGGCCTCCGTCTCCGGATGGGGCAC
TCTCTCCTACGGATCCAGCTCCATCCCCTCCCAGCTGCAGTACGTGAACG
TGAACATCGTTAGCCAGAGCCAGTGTGCTTCCTCCACCTACGGATACGGT
AGCCAGATCCGCAGCACCATGATCTGCGCTGCTGCCAGCGGCAAGGATGC
CTGCCAGGGTGACTCCGGTGGCCCACTGGTCTCCGGCGGAGTCCTCGTCG
GTGTTGTCTCCTGGGGATACGGATGCGCTTACTCCAACTACCCCGGTGTC
TATGCCGATGTTGCTGCCCTCCGCTCCTGGGTTATTAGCAATGCCGCAAG
CTTTCTAGACCAT
FMO03740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gammaTry-RA | 810 | CG30028-RA | 15..774 | 36..795 | 3800 | 100 | Plus |
| deltaTry-RA | 810 | CG12351-RA | 14..773 | 36..795 | 3800 | 100 | Plus |
| CG30031-RA | 811 | CG30031-RA | 16..775 | 36..795 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11349097..11349856 | 795..36 | 3800 | 100 | Minus |
| 2R | 25286936 | 2R | 11350826..11351585 | 36..795 | 3800 | 100 | Plus |
| 2R | 25286936 | 2R | 11355332..11356091 | 36..795 | 3800 | 100 | Plus |
| 2R | 25286936 | 2R | 11353601..11354360 | 795..36 | 3740 | 99.5 | Minus |
| 2R | 25286936 | 2R | 11344347..11345093 | 782..36 | 2640 | 90.2 | Minus |
| 2R | 25286936 | 2R | 11346341..11347100 | 36..795 | 2405 | 87.8 | Plus |
| 2R | 25286936 | 2R | 11345695..11346014 | 389..70 | 325 | 73.4 | Minus |
| 2R | 25286936 | 2R | 11345320..11345442 | 764..642 | 300 | 82.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:53 has no hits.
FMO03740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:48 Download gff for
FMO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| deltaTry-RA | 8..776 | 32..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:21:29 Download gff for
FMO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30031-RA | 1..765 | 35..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:43 Download gff for
FMO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30031-RA | 10..779 | 32..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:43 Download gff for
FMO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11350820..11351589 | 32..800 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:48 Download gff for
FMO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7238325..7239094 | 32..800 | 99 | | Plus |
