FMO03745.5prime Sequence
422 bp (422 high quality bases) assembled on 2008-07-21
> FMO03745.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCAAACTGATT
GCCCTCATCTCTGCCCTGTGCGCCGTGGCCAATGCCGGAGTAATCTCGCC
CTACAGCCATGGATATGGACTGGGATACGGCGCCGCCTTGGCTCCGGCTT
ATGCCGCTCCGGCTGTGATCTCGCACGCCCCGATCATCAAGAGCTACGCC
GCTCCCATTGTCGCCCACCCGGTGGCCACCTCCTATGCCAACACCTACAA
GGTGGCCACCAAGGCCATTCCAGTGGTCCATGCCGCTCCTCTGGTCCATG
CCGTGCCTGCTCTGCACTCCACCTCCACCTACCATGGATCCTATGGCGGC
TACGGTAGCTACGGTCTGGGATACGCCGGCTACGGACACGGAGCCTACCT
GCACGCAAGCTTTCTAGACCAT
FMO03745.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4962-RA | 774 | CG4962-RA | 65..433 | 36..404 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16295052..16295409 | 404..47 | 1790 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 5581..5623 | 302..263 | 109 | 76.7 | Minus |
FMO03745.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:46 Download gff for
FMO03745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4962-RA | 58..437 | 28..409 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:43 Download gff for
FMO03745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4962-RA | 51..430 | 28..409 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:50 Download gff for
FMO03745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4962-RA | 58..437 | 28..409 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:50 Download gff for
FMO03745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16295048..16295416 | 39..409 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:46 Download gff for
FMO03745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16288148..16288516 | 39..409 | 98 | | Minus |
