Clone FMO03750 Report

Search the DGRC for FMO03750

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:37
Well:50
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13993-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03750.5prime Sequence

434 bp (434 high quality bases) assembled on 2008-07-21

> FMO03750.5prime
ACTTCGTATAGCATAATTAAACGAAGTTATCAGTCGACATGGCACAAATG
GACATCGAATTGAAGAAGGCCTTCACCGAGATGCAGATCAATAAGCTGGA
GACGACCAAGAAGATCCACATGATCGACATGAAGTGCGACATGGTCAAGA
CAGGCAAACAAAAGTACCAGCTGACAGAAAAGGGCACCAGCAGCTTGGCC
GACGACACAAGAGTTTACCAGTCCGTGGGTCGCATGTTCCTGCTTACCGA
TGTACAGAATATGCGCGAGGACCTGAAGGCTAGGCAGGAGAAATGCGACA
AAGCGATAGAACTGCTGGAGAAGAAGAAGGAGTTCTTGCAGAAGTCCCTT
AAGAGCCAGGAAGACGGTCTGCGCGAGTTGGTGCAGCAGCGCAAGGAAGC
CGATCAGACTGCGAAAGCAAGCTTTCTAGACCAT

FMO03750.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG13993-RB 575 CG13993-RB 123..500 39..416 1890 100 Plus
CG13993-RA 595 CG13993-RA 143..520 39..416 1890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6069557..6069763 210..416 1035 100 Plus
2L 23513712 2L 6069345..6069489 67..211 725 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:41:41 has no hits.

FMO03750.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:58 Download gff for FMO03750.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13993-RA 132..520 28..416 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:55 Download gff for FMO03750.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13993-RA 108..496 28..416 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:01 Download gff for FMO03750.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13993-RA 132..520 28..416 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:01 Download gff for FMO03750.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6069559..6069763 212..416 100   Plus
2L 6069347..6069489 69..211 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:58 Download gff for FMO03750.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6069347..6069489 69..211 100 -> Plus
arm_2L 6069559..6069763 212..416 100   Plus