FMO03751.5prime Sequence
1251 bp (473 high quality bases) assembled on 2008-07-21
> FMO03751.5prime
ACTTCGTATAGCATAATTATACAAAGTTATCAATCGACATGACGCTCAAA
ATCGGTATATGCACCAGGCAGGATCTCGACGAGGCGATGAAGCTGCATAA
GCGGGAGCAGTACGAAGATGAGCGGAAGCGGCTCATTTTTAATGCCAAAC
AGCGTCTTTACGGGCTCGACCTACAAATGCTGGATCGCCAAATACTTGAG
AAAAAGAAGCAGCGAACCGCCCAGATGGAGTGCGACAAGAAATTTGAAGA
ACAGGAGCAGCTGCAAAAGCGTCTGATCCTGGCCCAGGAAATGGAGTTGG
AGAAAAAACACCGTGTGGTGGACTCGGATCTTAACTATTATCGCTGCCGC
TATCAGCGCAAGGAGCAGCGCCGCGAATTCGACCTAAATGATCCGAATTT
CTTGAAGAAGGCACGTCCAACAAGAGTCGCCGACAATGACATTTCGCTGG
GCGTGTCCAGTGCCCAGATCTTTCAAGGCGAGGACCTCTATAACTCTGAC
AGAAAGCAGCGGCAGCGGGAGCAGCAAAGAGCCTGGCTGGATCAGCAAGT
GCAGGAGCGTAAGAAGGCGGAGGATGCTCGCAAGCAGGCCGATAATGTGT
TGATGGACAACGTTGGTTGCAGAGACAAGCATCTGCAGGAGATGGCCAAG
TCTGATCACCAGATGCGCAACCAAGTCATCCAGCGAGTGCGTCAGTTCAA
TATCAACATGGCCAAGCAGAAGCAATTGGACCGCGAAAGGGAAAAGCGTG
AAAAGTACGAGGATGACATGGCCGAGATCTATAACATGCTCTCCAGCGAT
ATGCTAACTGAAATCCGGATGTGGCTCATCGCGCACCGATCCGAACAGAA
GATTGCCTTCTTGTATCGCGGCATGACGCCCGAAGACTTCGCGTGTTTCG
TCTTGGACAATATCAGCAGCTTCGTTTTGTCTATTCAGCGCAAGACGGAG
CCCAGAATGATGGACAAACAGTGGTGAGCAATACTCATTAATATGGACCG
CACTCCTGGTCCTTCACCAAATCGAGGATGATCGCGACGTTAGGCGAATT
CGATGGACTGATGCTGACGATTCCAAGTTGGCCATGAGCAGGATCGCCAG
CGCAAGAAGCCCTGTAGGCTAACGAATGTCCGTCTCCGATGACTTTTCCG
AATCAGTGCAAGAAAGAACCCAGGGTCAGCTCTAGGAACTATCGCTTGGG
CGCGTCGCGGCCCATGGTGTAGACGGTGGCCTTAAACTATAATTCATCTA
T
FMO03751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7264-RB | 1412 | CG7264-RB | 59..1188 | 39..1161 | 4920 | 96.7 | Plus |
| CG7264-RA | 1700 | CG7264-RA | 347..1476 | 39..1161 | 4920 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11829616..11830564 | 164..1106 | 3920 | 97.1 | Plus |
| 3L | 28110227 | 3L | 11829435..11829560 | 39..164 | 585 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:34 has no hits.
FMO03751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:33 Download gff for
FMO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 347..1483 | 39..1169 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:34 Download gff for
FMO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 347..1483 | 39..1169 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:01 Download gff for
FMO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 347..1483 | 39..1169 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:01 Download gff for
FMO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11829435..11829560 | 39..164 | 97 | -> | Plus |
| 3L | 11829617..11830627 | 165..1169 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:33 Download gff for
FMO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11822535..11822660 | 39..164 | 97 | -> | Plus |
| arm_3L | 11822717..11823727 | 165..1169 | 96 | | Plus |
